RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 COX15Q7KZN9 410 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 TTC5Q8N0Z6 440 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 DHRSXQ8N5I4 330 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 NKAPP1Q8N9T2 125 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 NANPQ8TBE9 248 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 FANK1Q8TC84 345 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 ZNF641Q96N77 438 aaPredicted RBP2.29□□□□□ -2.04
CCDC7-209ENST00000539197 TSNARE1Q96NA8 513 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 TMEM237Q96Q45 408 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 SLC6A7Q99884 636 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 HDHD3Q9BSH5 251 aaPredicted RBP2.29□□□□□ -2.04
CCDC7-209ENST00000539197 SELENOIQ9C0D9 397 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 ROGDIQ9GZN7 287 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 DBNDD1Q9H9R9 158 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 B9D1Q9UPM9 204 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 TRAF3IP3Q9Y228 551 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 CLCA3PQ9Y6N3 262 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 NCAPD2Q15021 1401 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 PDS5BQ9NTI5 1447 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 KRT87PA6NCN2 255 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 LAD1O00515 517 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 SDHDO14521 159 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 HCRTR1O43613 425 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 FAM189A1O60320 539 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 SPAG7O75391 227 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 SEC22BO75396 215 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 SCGB2A1O75556 95 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 C6orf47O95873 294 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 MRPL3P09001 348 aaKnown RBP2.28□□□□□ -2.04
CCDC7-209ENST00000539197 TSPY4P0CV99 314 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 TSPY10P0CW01 314 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 POU2F1P14859 743 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 FUT1P19526 365 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 CYP2B6P20813 491 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 CCND2P30279 289 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 FGF9P31371 208 aaPredicted RBP2.28□□□□□ -2.04
CCDC7-209ENST00000539197 RABIFP47224 123 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 KLK7P49862 253 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 KPNA2P52292 529 aaKnown RBP2.28□□□□□ -2.04
CCDC7-209ENST00000539197 TGFBR3Q03167 851 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 TRIM16LQ309B1 348 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 C11orf71Q6IPW1 123 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 TMIGD1Q6UXZ0 262 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 UNC5DQ6UXZ4 953 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 ZNF571Q7Z3V5 609 aaPredicted RBP2.28□□□□□ -2.04
CCDC7-209ENST00000539197 C6orf120Q7Z4R8 191 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 HMGN2P46Q86SG4 172 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 MMAAQ8IVH4 418 aaKnown RBP2.28□□□□□ -2.04
CCDC7-209ENST00000539197 ARRDC1Q8N5I2 433 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 OR56B4Q8NH76 319 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 BRSK1Q8TDC3 778 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 ST8SIA1Q92185 356 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 STARD8Q92502 1023 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 TESK2Q96S53 571 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 VCPKMTQ9H867 229 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 CALHM2Q9HA72 323 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 KIF25Q9UIL4 384 aa2.28□□□□□ -2.04
CCDC7-209ENST00000539197 PIN4Q9Y237 131 aaKnown RBP2.28□□□□□ -2.04
CCDC7-209ENST00000539197 LRP4O75096 1905 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 FRMPD4Q14CM0 1322 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 MAP3K15Q6ZN16 1313 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 A6NIZ1 184 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 C11orf94C9JXX5 98 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 TNFSF13O75888 250 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 B3GAT3O94766 335 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 LRATO95237 230 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 PGCP20142 388 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 TBXA2RP21731 343 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 SHMT2P34897 504 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 AP3M2P53677 418 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 RAP1BP61224 184 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 EWSR1Q01844 656 aaKnown RBP eCLIP2.27□□□□□ -2.05
CCDC7-209ENST00000539197 CNTN2Q02246 1040 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 BOLA3Q53S33 107 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 PIGGQ5H8A4 983 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 KLF17Q5JT82 389 aaPredicted RBP2.27□□□□□ -2.05
CCDC7-209ENST00000539197 C1orf100Q5SVJ3 147 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 FTMTQ8N4E7 242 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 KIR3DL3Q8N743 410 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 ATP6V0D2Q8N8Y2 350 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 DENND6BQ8NEG7 585 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 CCDC54Q8NEL0 328 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 OR6C4Q8NGE1 309 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 OR10A7Q8NGE5 316 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 SLC35A5Q9BS91 424 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 OR11A1Q9GZK7 315 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 POLR1EQ9GZS1 481 aaKnown RBP2.27□□□□□ -2.05
CCDC7-209ENST00000539197 TPK1Q9H3S4 243 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 WDR76Q9H967 626 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 AATFQ9NY61 560 aaKnown RBP eCLIP2.27□□□□□ -2.05
CCDC7-209ENST00000539197 NINJ2Q9NZG7 142 aa2.27□□□□□ -2.05
CCDC7-209ENST00000539197 ATP10DQ9P241 1426 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 PLEKHH1Q9ULM0 1364 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 SH3TC1Q8TE82 1336 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 VSTM2BA6NLU5 285 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 G3V4G9 280 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 LGI1O95970 557 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 CA1P00915 261 aaPredicted RBP2.26□□□□□ -2.05
CCDC7-209ENST00000539197 H2BFMP0C1H6 154 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 CHTF8P0CG12 524 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms