RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 IGHV3-9P01782 118 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 NUDT7P0C024 238 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 GKN3PP0CG01 181 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 TACR3P29371 465 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 POLR2HP52434 150 aaKnown RBP13.25□□□□□ -0.29
RAB40B-202ENST00000538809 CRISP3P54108 245 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 OR2B6P58173 313 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 FADDQ13158 208 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 ITGADQ13349 1161 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 GNA13Q14344 377 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 CAPRIN1Q14444 709 aaKnown RBP13.25□□□□□ -0.29
RAB40B-202ENST00000538809 STK11Q15831 433 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 Q6ZT83 130 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 MTDHQ86UE4 582 aaKnown RBP13.25□□□□□ -0.29
RAB40B-202ENST00000538809 ZNF100Q8IYN0 542 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 C10orf111Q8N326 155 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 ZHX1-C8orf76Q96EF9 292 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 PIP5K1AQ99755 562 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 HDHD5Q9BXW7 423 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 POTEKPQ9BYX7 375 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 BCL2L10Q9HD36 194 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 THUMPD1Q9NXG2 353 aaKnown RBP13.25□□□□□ -0.29
RAB40B-202ENST00000538809 CCDC167Q9P0B6 97 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 ZNF443Q9Y2A4 671 aaPredicted RBP13.25□□□□□ -0.29
RAB40B-202ENST00000538809 HDGFL3Q9Y3E1 203 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 PLCE1Q9P212 2302 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 NF1P21359 2839 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 ZC3H12DA2A288 527 aaKnown RBP13.24□□□□□ -0.29
RAB40B-202ENST00000538809 CFAP73A6NFT4 308 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 ZNF716A6NP11 495 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 NR5A2O00482 541 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 THBS1P07996 1170 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 IGHV1-2P23083 117 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 ACAA2P42765 397 aaKnown RBP13.24□□□□□ -0.29
RAB40B-202ENST00000538809 HTR3AP46098 478 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 SQLEQ14534 574 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 P2RY6Q15077 328 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 LIN52Q52LA3 116 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 RNF220Q5VTB9 566 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 PRAMEF8Q5VWM4 474 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 PRAMEF7Q5VXH5 474 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 SHEQ5VZ18 495 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 GALNT5Q7Z7M9 940 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 CCDC103Q8IW40 242 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 OR52P1PQ8NH57 321 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 PIGXQ8TBF5 258 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 SMR3AQ99954 134 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 TMEM204Q9BSN7 226 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 RSPO3Q9BXY4 272 aaPredicted RBP13.24□□□□□ -0.29
RAB40B-202ENST00000538809 ADAM19Q9H013 955 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 RAD21L1Q9H4I0 556 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 A4GALTQ9NPC4 353 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 ZNF446Q9NWS9 450 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 EMC3Q9P0I2 261 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 VAPAQ9P0L0 249 aa13.24□□□□□ -0.29
RAB40B-202ENST00000538809 NOSIPQ9Y314 301 aaKnown RBP13.24□□□□□ -0.29
RAB40B-202ENST00000538809 IGKV3D-15A0A087WSY6 115 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 A0A0G2JPF8 293 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 HNRNPCL2B2RXH8 293 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 HNRNPCL3B7ZW38 293 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 HS3ST1O14792 307 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 CLOCKO15516 846 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 ARHGEF9O43307 516 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 HNRNPCL1O60812 293 aaKnown RBP13.23□□□□□ -0.29
RAB40B-202ENST00000538809 HNRNPCL4P0DMR1 293 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 IMPDH2P12268 514 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 UQCRBP14927 111 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 FKBP2P26885 142 aaKnown RBP13.23□□□□□ -0.29
RAB40B-202ENST00000538809 SLC1A3P43003 542 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 CLK1P49759 484 aaKnown RBP13.23□□□□□ -0.29
RAB40B-202ENST00000538809 AGKQ53H12 422 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 SEZ6L2Q6UXD5 910 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 ZNF440Q8IYI8 595 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 LRRC75A-AS1Q8N1F1 130 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 UBE2J2Q8N2K1 259 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 CLIP4Q8N3C7 705 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 CADM2Q8N3J6 435 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 AKAP1Q92667 903 aaKnown RBP eCLIP13.23□□□□□ -0.29
RAB40B-202ENST00000538809 NEUROG1Q92886 237 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 MAL2Q969L2 176 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 DDIT4LQ96D03 193 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 THOC1Q96FV9 657 aaKnown RBP13.23□□□□□ -0.29
RAB40B-202ENST00000538809 IKZF5Q9H5V7 419 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 TMEM181Q9P2C4 612 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 PRDM4Q9UKN5 801 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 RNF115Q9Y4L5 304 aa13.23□□□□□ -0.29
RAB40B-202ENST00000538809 CR1P17927 2039 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 A0A1W2PP18 115 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 ZNF208O43345 1280 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 DNPH1O43598 174 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 RAD51DO75771 328 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 ARAFP10398 606 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 PRG2P13727 222 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 COX5AP20674 150 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 ADSLP30566 484 aaPredicted RBP13.22□□□□□ -0.29
RAB40B-202ENST00000538809 NTF4P34130 210 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 PTH2RP49190 550 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 H3F3AP84243 136 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 PDK3Q15120 406 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 NCMAPQ5T1S8 102 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms