RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ACTA1P68133 377 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 FUT7Q11130 342 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 ELOCQ15369 112 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 SFXN4Q6P4A7 337 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 SAMD12Q8N8I0 201 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 TSTD1Q8NFU3 115 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 ZNRF4Q8WWF5 429 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 SPRTNQ9H040 489 aaPredicted RBP22.84■■□□□ 1.25
RAB40C-204ENST00000538492 A0A087WUJ7 227 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 LYRM1O43325 122 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 THBS2P35442 1172 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 HOXD12P35452 270 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 DDOSTP39656 456 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 FASLGP48023 281 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 ZFP69Q49AA0 526 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 ACSM3Q53FZ2 586 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 TMEM53Q6P2H8 277 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 ZNF615Q8N8J6 731 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 SLC2A12Q8TD20 617 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 NMNAT3Q96T66 252 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 RBFOX1Q9NWB1 397 aaKnown RBP22.83■■□□□ 1.25
RAB40C-204ENST00000538492 NLKQ9UBE8 527 aa22.83■■□□□ 1.25
RAB40C-204ENST00000538492 CACNA1IQ9P0X4 2223 aa22.83■■□□□ 1.24
RAB40C-204ENST00000538492 CHURC1-FNTBB4DL54 471 aa22.83■■□□□ 1.24
RAB40C-204ENST00000538492 IDH3BO43837 385 aa22.83■■□□□ 1.24
RAB40C-204ENST00000538492 PAHP00439 452 aa22.83■■□□□ 1.24
RAB40C-204ENST00000538492 EIF4EP06730 217 aaKnown RBP22.83■■□□□ 1.24
RAB40C-204ENST00000538492 PRKAR1AP10644 381 aa22.83■■□□□ 1.24
RAB40C-204ENST00000538492 GLULP15104 373 aa22.83■■□□□ 1.24
RAB40C-204ENST00000538492 FNTBP49356 437 aa22.83■■□□□ 1.24
RAB40C-204ENST00000538492 POU4F2Q12837 409 aa22.83■■□□□ 1.24
RAB40C-204ENST00000538492 CCDC85BQ15834 202 aaPredicted RBP22.83■■□□□ 1.24
RAB40C-204ENST00000538492 DMKNQ6E0U4 476 aaPredicted RBP22.83■■□□□ 1.24
RAB40C-204ENST00000538492 WACQ9BTA9 647 aa22.83■■□□□ 1.24
RAB40C-204ENST00000538492 EFCAB7A8K855 629 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 GABRA4P48169 554 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 PSMD4P55036 377 aaKnown RBP22.82■■□□□ 1.24
RAB40C-204ENST00000538492 SLC25A35Q3KQZ1 300 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 ZNF57Q68EA5 555 aaPredicted RBP22.82■■□□□ 1.24
RAB40C-204ENST00000538492 SYT13Q7L8C5 426 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 SLC7A5P1Q8MH63 180 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 ZNF321PQ8N8H1 164 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 ZPLD1Q8TCW7 415 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 C3orf49Q96BT1 292 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 GDF15Q99988 308 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 YIPF2Q9BWQ6 316 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 PLCL2Q9UPR0 1127 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 IGHV1OR15-9A0A0B4J2B8 117 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 ZNF749O43361 778 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 PTBP1P26599 531 aaKnown RBP eCLIP22.82■■□□□ 1.24
RAB40C-204ENST00000538492 RIN1Q13671 783 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 KCNAB1Q14722 419 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 NKAIN2Q5VXU1 208 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 MZT2BQ6NZ67 158 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 OR4M1Q8NGD0 313 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 SLC7A6Q92536 515 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 CNN2Q99439 309 aaKnown RBP22.82■■□□□ 1.24
RAB40C-204ENST00000538492 RANGRFQ9HD47 186 aaPredicted RBP22.82■■□□□ 1.24
RAB40C-204ENST00000538492 ST6GALNAC2Q9UJ37 374 aa22.82■■□□□ 1.24
RAB40C-204ENST00000538492 FAM240BA0A1B0GVZ2 78 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 C17orf105B2RV13 164 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 SC5DO75845 299 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 CD53P19397 219 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 CCR4P51679 360 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 HSD17B7P56937 341 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 TRAM1Q15629 374 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 DEFB133Q30KQ1 61 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 MED25Q71SY5 747 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 PXKQ7Z7A4 578 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 SYT9Q86SS6 491 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 CMIPQ8IY22 773 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 RASD2Q96D21 266 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 HDHD2Q9H0R4 259 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 MTCH2Q9Y6C9 303 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 A8MUA0 341 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 CLPSP04118 112 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 CD1CP29017 333 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 NRG3P56975 720 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 ERVK-25P63136 954 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 LYPD4Q6UWN0 246 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 LRRC28Q86X40 367 aaPredicted RBP22.81■■□□□ 1.24
RAB40C-204ENST00000538492 PELI1Q96FA3 418 aa22.81■■□□□ 1.24
RAB40C-204ENST00000538492 FYTTD1Q96QD9 318 aaKnown RBP22.81■■□□□ 1.24
RAB40C-204ENST00000538492 SEC16AO15027 2179 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 GAS6Q14393 721 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 CD226Q15762 336 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 TATDN3Q17R31 274 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 TRILQ7L0X0 811 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 ADAMTS18Q8TE60 1221 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 SLC35B4Q969S0 331 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 KCNJ15Q99712 375 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 TTYH2Q9BSA4 534 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 PNO1Q9NRX1 252 aaKnown RBP22.8■■□□□ 1.24
RAB40C-204ENST00000538492 CYSLTR2Q9NS75 346 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 ICAM5Q9UMF0 924 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 A0A0G2JK05 382 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 BLACEA4D250 179 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 SDC3O75056 442 aa22.8■■□□□ 1.24
RAB40C-204ENST00000538492 NME1P15531 152 aaKnown RBP22.8■■□□□ 1.24
RAB40C-204ENST00000538492 PON3Q15166 354 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms