RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 LRRC23Q53EV4 343 aaPredicted RBP3.09□□□□□ -1.91
PRKDC-205ENST00000535375 BLOC1S2Q6QNY1 142 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 ZNF679Q8IYX0 411 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 LRRC43Q8N309 656 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 CLDN19Q8N6F1 224 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 SYT14Q8NB59 555 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 AENQ8WTP8 325 aaKnown RBP3.09□□□□□ -1.91
PRKDC-205ENST00000535375 UCN3Q969E3 161 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 SLC41A3Q96GZ6 507 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 MCHR1Q99705 422 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 DUSP16Q9BY84 665 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 GNG12Q9UBI6 72 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 RNF14Q9UBS8 474 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 KIF16BQ96L93 1317 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 NACAE9PAV3 2078 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 C15orf38-AP3S2A0A0A6YYH1 394 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 GJE1A6NN92 205 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 SULT2B1O00204 365 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 F10P00742 488 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 MMP1P03956 469 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 MAGEA5P43359 124 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 SUCLG1P53597 346 aaKnown RBP3.08□□□□□ -1.92
PRKDC-205ENST00000535375 RIPPLY1Q0D2K3 151 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 GPNMBQ14956 572 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 C16orf72Q14CZ0 275 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 TIGITQ495A1 244 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 GGTA1PQ4G0N0 100 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 APTXQ7Z2E3 356 aaKnown RBP3.08□□□□□ -1.92
PRKDC-205ENST00000535375 LINC01561Q8N1V8 128 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 C15orf54Q8N8G6 183 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 FAM151AQ8WW52 585 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 SHC3Q92529 594 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 PIGCQ92535 297 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 COQ2Q96H96 371 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 AMDHD1Q96NU7 426 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 CITED1Q99966 193 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 EDEM2Q9BV94 578 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 PIPOXQ9P0Z9 390 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 WRAP73Q9P2S5 460 aaPredicted RBP3.08□□□□□ -1.92
PRKDC-205ENST00000535375 RASD1Q9Y272 281 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 ASB3Q9Y575 518 aa3.08□□□□□ -1.92
PRKDC-205ENST00000535375 ANKRD63C9JTQ0 380 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 H3BMQ9 156 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 ARPC3O15145 178 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 MTX2O75431 263 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 ECI2O75521 394 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 PALMO75781 387 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 LALBAP00709 142 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 H2BFMP0C1H6 154 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 PRPS1P60891 318 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 CCDC173Q0VFZ6 552 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 LAGE3Q14657 143 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 PDK3Q15120 406 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 SLC5A12Q1EHB4 618 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 MAJINQ3KP22 176 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 ACSM5Q6NUN0 579 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 FAHD2BQ6P2I3 314 aaPredicted RBP3.07□□□□□ -1.92
PRKDC-205ENST00000535375 ZNF429Q86V71 674 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 MDS2Q8NDY4 140 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 TRMT10AQ8TBZ6 339 aaKnown RBP3.07□□□□□ -1.92
PRKDC-205ENST00000535375 CTNNBL1Q8WYA6 563 aaPredicted RBP3.07□□□□□ -1.92
PRKDC-205ENST00000535375 PELI1Q96FA3 418 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 FAHD2AQ96GK7 314 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 C7orf34Q96L11 122 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 C12orf66Q96MD2 445 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 SECISBP2Q96T21 854 aaKnown RBP3.07□□□□□ -1.92
PRKDC-205ENST00000535375 MYCBPQ99417 103 aaPredicted RBP3.07□□□□□ -1.92
PRKDC-205ENST00000535375 RIT2Q99578 217 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 SLC6A7Q99884 636 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 PLGRKTQ9HBL7 147 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 SMOXQ9NWM0 555 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 SIGLEC8Q9NYZ4 499 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 C6orf203Q9P0P8 240 aaPredicted RBP3.07□□□□□ -1.92
PRKDC-205ENST00000535375 COX16Q9P0S2 106 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 PSG11Q9UQ72 335 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 PRG3Q9Y2Y8 225 aaPredicted RBP3.07□□□□□ -1.92
PRKDC-205ENST00000535375 UGT2A1Q9Y4X1 527 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 OARD1Q9Y530 152 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 FRMPD4Q14CM0 1322 aa3.07□□□□□ -1.92
PRKDC-205ENST00000535375 A0A1B0GWB2 263 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 NKX2-6A6NCS4 301 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 TCP11X1B4DZS4 312 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 NPIPA7E9PJI5 369 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 TMX2-CTNND1H3BSU7 103 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 PRRG1O14668 218 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 MSH4O15457 936 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 HCN1O60741 890 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 SURF6O75683 361 aaKnown RBP3.06□□□□□ -1.92
PRKDC-205ENST00000535375 SLITRK3O94933 977 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 WISP3O95389 354 aaPredicted RBP3.06□□□□□ -1.92
PRKDC-205ENST00000535375 NPIPA8P0DM63 369 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 ZNF44P15621 663 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 RCC1P18754 421 aaPredicted RBP3.06□□□□□ -1.92
PRKDC-205ENST00000535375 CD80P33681 288 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 MAP2K1Q02750 393 aaPredicted RBP3.06□□□□□ -1.92
PRKDC-205ENST00000535375 RAB40BQ12829 278 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 RIPK1Q13546 671 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 KIAA1328Q86T90 577 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 LINC01551Q86U37 167 aa3.06□□□□□ -1.92
PRKDC-205ENST00000535375 EIF1ADQ8N9N8 165 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms