RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 CHI3L1P36222 383 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 MAGEA8P43361 318 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 ETFDHQ16134 617 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 SLC9B1Q4ZJI4 515 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 PDCD4Q53EL6 469 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 GPAT3Q53EU6 434 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 ZNF621Q6ZSS3 439 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 BHLHA15Q7RTS1 189 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 GALNT5Q7Z7M9 940 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 HMGN2P46Q86SG4 172 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 ATG4DQ86TL0 474 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 ARFGAP2Q8N6H7 521 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 TRIML2Q8N7C3 387 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 ZNF433Q8N7K0 673 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 ANKRD42Q8N9B4 389 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 ZNF563Q8TA94 476 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 CNOT9Q92600 299 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 ZNF775Q96BV0 537 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 PANX1Q96RD7 426 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 PAIP2Q9BPZ3 127 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 POTEKPQ9BYX7 375 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 PLA2G12AQ9BZM1 189 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 ADAM19Q9H013 955 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 MTHFD2LQ9H903 347 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 TMBIM4Q9HC24 238 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 OSGIN1Q9UJX0 560 aa8.88□□□□□ -0.99
CLSTN3-203ENST00000534830 DSPPQ9NZW4 1301 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 YLPM1P49750 1951 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 TMEM72A0PK05 275 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 PDLIM1O00151 329 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 AP3D1O14617 1153 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 KLF11O14901 512 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 ZNF208O43345 1280 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 RAMP1O60894 148 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 LYZL6O75951 148 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 IL6P05231 212 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 GSNP06396 782 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 SOD3P08294 240 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 ZCCHC18P0CG32 403 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 KITP10721 976 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 IMPDH2P12268 514 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 IDO1P14902 403 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 RYKP34925 604 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 ACVR1BP36896 505 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 ACAA2P42765 397 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 HTR3AP46098 478 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 IDH2P48735 452 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 MAP2K6P52564 334 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 MAGOHP61326 146 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 RPS4XP62701 263 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 EPS8Q12929 822 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 GSTA3Q16772 222 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 PGGHGQ32M88 737 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 ZNF672Q499Z4 452 aaPredicted RBP8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 TIMM23BQ5SRD1 257 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 BEND6Q5SZJ8 279 aaPredicted RBP8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 C6orf52Q5T4I8 152 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 FBXW9Q5XUX1 488 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 ATG16L1Q676U5 607 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 P2RY8Q86VZ1 359 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 CCDC103Q8IW40 242 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 NEUROG1Q92886 237 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 TRMT61AQ96FX7 289 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 KCNK17Q96T54 332 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 TRIM2Q9C040 744 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 GRIP2Q9C0E4 1043 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 OR11A1Q9GZK7 315 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 ESRP2Q9H6T0 727 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 MANSC1Q9H8J5 431 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 SDR39U1Q9NRG7 319 aaPredicted RBP8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 ZIM2Q9NZV7 527 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 LAMP3Q9UQV4 416 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 CHST2Q9Y4C5 530 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 RNF115Q9Y4L5 304 aa8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 SPIN1Q9Y657 262 aaPredicted RBP8.87□□□□□ -0.99
CLSTN3-203ENST00000534830 TMED7-TICAM2A0A0A6YYA0 188 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 SHISA9B4DS77 424 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 RFXANKO14593 260 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 SLC22A3O75751 556 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 KRT75O95678 551 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 CD8AP01732 235 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 DBIP07108 87 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 CD3EP07766 207 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 TFPTP0C1Z6 253 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 TFPIP10646 304 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 HOXB9P17482 250 aaPredicted RBP8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 SLC1A3P43003 542 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 MRPL19P49406 292 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 ANXA11P50995 505 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 POLR2HP52434 150 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 BSPH1Q075Z2 132 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 PPA1Q15181 289 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 MRPL2Q5T653 305 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 MSANTD1Q6ZTZ1 278 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 SSX8Q7RTT4 187 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 LSRQ86X29 649 aaPredicted RBP8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 PIGXQ8TBF5 258 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 WDR60Q8WVS4 1066 aa8.86□□□□□ -0.99
CLSTN3-203ENST00000534830 FBXW5Q969U6 566 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms