RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 HTRA1Q92743 480 aa14.82□□□□□ -0.04
CAPRIN1-216ENST00000534042 ZG16BQ96DA0 208 aa14.82□□□□□ -0.04
CAPRIN1-216ENST00000534042 AKTIPQ9H8T0 292 aa14.82□□□□□ -0.04
CAPRIN1-216ENST00000534042 EXOSC3Q9NQT5 275 aaKnown RBP14.82□□□□□ -0.04
CAPRIN1-216ENST00000534042 TMEM181Q9P2C4 612 aa14.82□□□□□ -0.04
CAPRIN1-216ENST00000534042 UPB1Q9UBR1 384 aa14.82□□□□□ -0.04
CAPRIN1-216ENST00000534042 TRAPPC4Q9Y296 219 aa14.82□□□□□ -0.04
CAPRIN1-216ENST00000534042 SCN2BO60939 215 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 ITGA5P08648 1049 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 FAM157CP0CG43 387 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 CREB1P16220 341 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 SLC25A16P16260 332 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 HTR3AP46098 478 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 IDH2P48735 452 aaKnown RBP14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 KHKP50053 298 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 LOXL1Q08397 574 aaPredicted RBP14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 FUT5Q11128 374 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 AP1ARQ63HQ0 302 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 SAXO2Q658L1 398 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 HMGN2P46Q86SG4 172 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 ZNF525Q8N782 197 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 OR52E4Q8NGH9 312 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 FAM168AQ92567 244 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 NAA11Q9BSU3 229 aaPredicted RBP14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 INPP5KQ9BT40 448 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 ROPN1BQ9BZX4 212 aaPredicted RBP14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 FKRPQ9H9S5 495 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 ROPN1Q9HAT0 212 aaPredicted RBP14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 PARPBPQ9NWS1 579 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 MARCOQ9UEW3 520 aaPredicted RBP14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 CDC42EP3Q9UKI2 254 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 SLC9A8Q9Y2E8 581 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 ATP23Q9Y6H3 246 aa14.81□□□□□ -0.04
CAPRIN1-216ENST00000534042 TMED7-TICAM2A0A0A6YYA0 188 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 CLDN24A6NM45 220 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 H7C417 338 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 PDLIM1O00151 329 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 ITM2AO43736 263 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 EIF1BO60739 113 aaKnown RBP14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 BMP4P12644 408 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 CHI3L1P36222 383 aaPredicted RBP14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 PHC1P78364 1004 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 SLC35A1P78382 337 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 H3F3AP84243 136 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 VLDLRP98155 873 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 CHRNB3Q05901 458 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 C9orf135Q5VTT2 229 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 WDR31Q8NA23 367 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 CNOT9Q92600 299 aaKnown RBP14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 PMM1Q92871 262 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 TESCQ96BS2 214 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 DDIT4LQ96D03 193 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 NEURL3Q96EH8 262 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 KCNK17Q96T54 332 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 SLC35A5Q9BS91 424 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 AMBRA1Q9C0C7 1298 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 DCTN4Q9UJW0 460 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 AMDHD2Q9Y303 409 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 TMED7Q9Y3B3 224 aa14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 ANK3Q12955 4377 aaKnown RBP14.8□□□□□ -0.04
CAPRIN1-216ENST00000534042 TYROBPO43914 113 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 MYZAPP0CAP1 466 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 ETV4P43268 484 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 POLR2HP52434 150 aaKnown RBP14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 TGFBR3Q03167 851 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 CASP8Q14790 479 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 CMIPQ8IY22 773 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 C17orf78Q8N4C9 275 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 ZNF781Q8N8C0 355 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 C1orf162Q8NEQ5 155 aaPredicted RBP14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 PKNOX2Q96KN3 472 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 BEX2Q9BXY8 128 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 MANSC1Q9H8J5 431 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 SLC17A5Q9NRA2 495 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 SLC7A10Q9NS82 523 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 OSGIN1Q9UJX0 560 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 FLVCR1Q9Y5Y0 555 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 PMF1-BGLAPU3KQ54 211 aa14.79□□□□□ -0.04
CAPRIN1-216ENST00000534042 TMEM72A0PK05 275 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 PRAMEF27A3QJZ7 478 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 WDR91A4D1P6 747 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 HMGN4O00479 90 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 AP3D1O14617 1153 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 PHF1O43189 567 aaPredicted RBP14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 ZNF208O43345 1280 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 SERPINE1P05121 402 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 CSF3P09919 207 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 TACR3P29371 465 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 APOBEC3AP31941 199 aaPredicted RBP14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 S100A3P33764 101 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 EFNA4P52798 201 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 CLNS1AP54105 237 aaKnown RBP14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 ABCE1P61221 599 aaKnown RBP14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 PLAURQ03405 335 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 CHI3L2Q15782 390 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 DPY19L1Q2PZI1 675 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 SPANXN4Q5MJ08 99 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 C1QTNF12Q5T7M4 302 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 TSPO2Q5TGU0 170 aa14.78□□□□□ -0.04
CAPRIN1-216ENST00000534042 CYB5R2Q6BCY4 276 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms