RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 HDGFL3Q9Y3E1 203 aa9.25□□□□□ -0.93
CAPN1-225ENST00000533704 CIB4A0PJX0 185 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 ZC3H12DA2A288 527 aaKnown RBP9.24□□□□□ -0.93
CAPN1-225ENST00000533704 CCT8L1PA6NM43 557 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 CLIC1O00299 241 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 RAMP1O60894 148 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 TGDSO95455 350 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 CD3EP07766 207 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 TFPTP0C1Z6 253 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 IGHV1-2P23083 117 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 FKBP2P26885 142 aaKnown RBP9.24□□□□□ -0.93
CAPN1-225ENST00000533704 HOXC12P31275 282 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 MAGEA8P43361 318 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 COPZ1P61923 177 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 SLC35A1P78382 337 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 BNIP2Q12982 314 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 AGKQ53H12 422 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 SHEQ5VZ18 495 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 AP1ARQ63HQ0 302 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 CASP12Q6UXS9 341 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 HDXQ7Z353 690 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 ATG4DQ86TL0 474 aaPredicted RBP9.24□□□□□ -0.93
CAPN1-225ENST00000533704 CLIP4Q8N3C7 705 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 TMEM171Q8WVE6 324 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 HSD17B8Q92506 261 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 AKAP1Q92667 903 aaKnown RBP eCLIP9.24□□□□□ -0.93
CAPN1-225ENST00000533704 GTF2H4Q92759 462 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 PMM1Q92871 262 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 MAL2Q969L2 176 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 APH1AQ96BI3 265 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 MUCL1Q96DR8 90 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 SPDL1Q96EA4 605 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 NAA11Q9BSU3 229 aaPredicted RBP9.24□□□□□ -0.93
CAPN1-225ENST00000533704 CCDC28BQ9BUN5 200 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 POTEKPQ9BYX7 375 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 RAD21L1Q9H4I0 556 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 GSX1Q9H4S2 264 aaPredicted RBP9.24□□□□□ -0.93
CAPN1-225ENST00000533704 ESRP2Q9H6T0 727 aaKnown RBP9.24□□□□□ -0.93
CAPN1-225ENST00000533704 ARGLU1Q9NWB6 273 aaPredicted RBP9.24□□□□□ -0.93
CAPN1-225ENST00000533704 CCDC167Q9P0B6 97 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 ZNF232Q9UNY5 417 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 RNF115Q9Y4L5 304 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 PCDHB14Q9Y5E9 798 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 TLN2Q9Y4G6 2542 aa9.24□□□□□ -0.93
CAPN1-225ENST00000533704 IGKV3D-15A0A087WSY6 115 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 A0A096LPI6 279 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 A0A0G2JPF8 293 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 CDHR4A6H8M9 788 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 ZNF716A6NP11 495 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 HMGB1P1B2RPK0 211 aaPredicted RBP9.23□□□□□ -0.93
CAPN1-225ENST00000533704 HNRNPCL2B2RXH8 293 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 HNRNPCL3B7ZW38 293 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 GPR171O14626 319 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 HS3ST1O14792 307 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 ZNF208O43345 1280 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 FRS3O43559 492 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 DNPH1O43598 174 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 HNRNPCL1O60812 293 aaKnown RBP9.23□□□□□ -0.93
CAPN1-225ENST00000533704 MRPL33O75394 65 aaKnown RBP9.23□□□□□ -0.93
CAPN1-225ENST00000533704 RAD51DO75771 328 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 HNRNPCL4P0DMR1 293 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 IMPDH2P12268 514 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 PRG2P13727 222 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 GGT1P19440 569 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 ADSLP30566 484 aaPredicted RBP9.23□□□□□ -0.93
CAPN1-225ENST00000533704 IDUAP35475 653 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 CLK1P49759 484 aaKnown RBP9.23□□□□□ -0.93
CAPN1-225ENST00000533704 CEACAM7Q14002 265 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 PPA1Q15181 289 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 RGNQ15493 299 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 OR7A5Q15622 319 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 ZNF311Q5JNZ3 666 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 OTUD3Q5T2D3 398 aaPredicted RBP9.23□□□□□ -0.93
CAPN1-225ENST00000533704 GCNT6Q5T4J0 391 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 C9orf135Q5VTT2 229 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 WBP2NLQ6ICG8 309 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 Q71RC1 249 aaPredicted RBP9.23□□□□□ -0.93
CAPN1-225ENST00000533704 YTHDF3Q7Z739 585 aaKnown RBP9.23□□□□□ -0.93
CAPN1-225ENST00000533704 KRTAP1-3Q8IUG1 177 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 NFKBIDQ8NI38 313 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 NEUROG1Q92886 237 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 Q96MF0 132 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 PIP5K1AQ99755 562 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 SPATA9Q9BWV2 254 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 ARMC7Q9H6L4 198 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 ADPRHL2Q9NX46 363 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 THUMPD1Q9NXG2 353 aaKnown RBP9.23□□□□□ -0.93
CAPN1-225ENST00000533704 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.23□□□□□ -0.93
CAPN1-225ENST00000533704 TRAPPC4Q9Y296 219 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 DSPPQ9NZW4 1301 aa9.23□□□□□ -0.93
CAPN1-225ENST00000533704 ALPK2Q86TB3 2170 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 A0A1W2PR80 420 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 FAAHO00519 579 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 SMAD7O15105 426 aaKnown RBP9.22□□□□□ -0.93
CAPN1-225ENST00000533704 EIF1BO60739 113 aaKnown RBP9.22□□□□□ -0.93
CAPN1-225ENST00000533704 AKR7A3O95154 331 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 THBS1P07996 1170 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 ACAA2P42765 397 aaKnown RBP9.22□□□□□ -0.93
CAPN1-225ENST00000533704 PTH2RP49190 550 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 HOXC5Q00444 222 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms