RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 HLA-DQA1Q5Y7H0 255 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 TYW3Q6IPR3 259 aaKnown RBP10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 FIGNL1Q6PIW4 674 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 FRRS1Q6ZNA5 592 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC29A4Q7RTT9 530 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 VTCN1Q7Z7D3 282 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 HMGN2P46Q86SG4 172 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 PACS2Q86VP3 889 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 ARMC8Q8IUR7 673 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 C9orf40Q8IXQ3 194 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZNF611Q8N823 705 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 SMYD1Q8NB12 490 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 LZICQ8WZA0 190 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC47A1Q96FL8 570 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 LCORQ96JN0 433 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 HSH2DQ96JZ2 352 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 BTBD9Q96Q07 612 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 PKP2Q99959 881 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 PIGQQ9BRB3 760 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 SPATA5L1Q9BVQ7 753 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 RSPO3Q9BXY4 272 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 SAP130Q9H0E3 1048 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 NXF5Q9H1B4 397 aaKnown RBP10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 UBQLN3Q9H347 655 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 MAGIXQ9H6Y5 334 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 TMEM160Q9NX00 188 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 ELOVL5Q9NYP7 299 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 MKLN1Q9UL63 735 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 WDR45Q9Y484 360 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 OR10H1Q9Y4A9 318 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 FRG2CA6NGY1 282 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 C16orf97H3BN30 126 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 TP53I11O14683 189 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 TPST1O60507 370 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 TNFSF13O75888 250 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 SMNDC1O75940 238 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 IGKV1D-16P01601 117 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 MT-ND1P03886 318 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 CD247P20963 164 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 KCNJ5P48544 419 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 MASP1P48740 699 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 RPS4XP62701 263 aaKnown RBP10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 KCNJ10P78508 379 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 EBPQ15125 230 aaKnown RBP10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 GPR68Q15743 365 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 SNCBQ16143 134 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 NNATQ16517 81 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 DUSP7Q16829 419 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 DCST1Q5T197 706 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 C6orf52Q5T4I8 152 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 AP1ARQ63HQ0 302 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 GCNT2Q8N0V5 402 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 LILRA2Q8N149 483 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF619Q8N2I2 560 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 PQLC1Q8N2U9 271 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 GPR32P1Q8NGA4 272 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 OR52P1PQ8NH57 321 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 LRTOMTQ8WZ04 291 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 DIO2Q92813 273 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 PMM1Q92871 262 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 GAL3ST4Q96RP7 486 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 TUBA1CQ9BQE3 449 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 PLA2G12AQ9BZM1 189 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 WWTR1Q9GZV5 400 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF350Q9GZX5 532 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 POLE3Q9NRF9 147 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 C15orf41Q9Y2V0 281 aa10.14□□□□□ -0.79
TRAPPC4-213ENST00000533149 HS3ST1O14792 307 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 TO15178 435 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 SEMG1P04279 462 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 CRHP06850 196 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 GUSBP08236 651 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 POU2F1P14859 743 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 HOXB6P17509 224 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 ATP6V1C1P21283 382 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 FASP25445 335 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 RFX3P48380 749 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 SESN3P58005 492 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 NTRK2Q16620 822 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 IFI44LQ53G44 452 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 EIPR1Q53HC9 387 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 BEX5Q5H9J7 111 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF311Q5JNZ3 666 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZNF704Q6ZNC4 412 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZAR1Q86SH2 424 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 AMIGO2Q86SJ2 522 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 ADGRE4PQ86SQ3 457 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 VRK2Q86Y07 508 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZDHHC21Q8IVQ6 265 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 PEX5LQ8IYB4 626 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 SPPL2AQ8TCT8 520 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 RASSF5Q8WWW0 418 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 TP53INP1Q96A56 240 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 ZC3HAV1LQ96H79 300 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 GNRHR2Q96P88 292 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 KCNK17Q96T54 332 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 QRSL1Q9H0R6 528 aaKnown RBP10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 YY1AP1Q9H869 796 aa10.13□□□□□ -0.79
TRAPPC4-213ENST00000533149 IL1RAPQ9NPH3 570 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms