RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 BCHEP06276 602 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 PAX1P15863 534 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 CCNA2P20248 432 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 IGHV1-2P23083 117 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 IDH3AP50213 366 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 MAP2K6P52564 334 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 CRISP3P54108 245 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 Q5PR19 223 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 SLC2A7Q6PXP3 512 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 ATG4DQ86TL0 474 aaPredicted RBP13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 ZNF440Q8IYI8 595 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 ZNF611Q8N823 705 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 OR52P1PQ8NH57 321 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 PIGXQ8TBF5 258 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 TMEM19Q96HH6 336 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 EBF4Q9BQW3 602 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 POTEKPQ9BYX7 375 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 GSX2Q9BZM3 304 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 TCF7L2Q9NQB0 619 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 CALML5Q9NZT1 146 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 EMC3Q9P0I2 261 aa13.97□□□□□ -0.17
LDLRAD3-205ENST00000532490 USF3Q68DE3 2245 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 A0A0G2JPF8 293 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 HNRNPCL2B2RXH8 293 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 HNRNPCL3B7ZW38 293 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 HNRNPCL1O60812 293 aaKnown RBP13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 NUDT7P0C024 238 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 GKN3PP0CG01 181 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 HNRNPCL4P0DMR1 293 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 BMP2P12643 396 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 OR2B6P58173 313 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 RGNQ15493 299 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 LIN52Q52LA3 116 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 RPS26P11Q5JNZ5 115 aaPredicted RBP13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 C6orf10Q5SRN2 563 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 RNF220Q5VTB9 566 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 FBXW9Q5XUX1 488 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 ALKBH2Q6NS38 261 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 BLOC1S3Q6QNY0 202 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 P3H2Q8IVL5 708 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 MSRB3Q8IXL7 192 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 ZNF100Q8IYN0 542 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 CLIP4Q8N3C7 705 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 ZNF433Q8N7K0 673 aaPredicted RBP13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 LRRC8CQ8TDW0 803 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 AKAP1Q92667 903 aaKnown RBP eCLIP13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 DDIT4LQ96D03 193 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 ZHX1-C8orf76Q96EF9 292 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 C18orf12Q96KH6 178 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 SMR3AQ99954 134 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 CCDC28BQ9BUN5 200 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 RSPO3Q9BXY4 272 aaPredicted RBP13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 ZNF701Q9NV72 531 aaPredicted RBP13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 THUMPD1Q9NXG2 353 aaKnown RBP13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 SLC25A37Q9NYZ2 338 aa13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 ZNF443Q9Y2A4 671 aaPredicted RBP13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 NOSIPQ9Y314 301 aaKnown RBP13.96□□□□□ -0.17
LDLRAD3-205ENST00000532490 A0A096LPI6 279 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 DPRXA6NFQ7 191 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 CLIC1O00299 241 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 GPR171O14626 319 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 POLR3GO15318 223 aaPredicted RBP13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 TMCC2O75069 709 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 THBS1P07996 1170 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 PRG2P13727 222 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 HOXB4P17483 251 aaPredicted RBP13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 PTH2RP49190 550 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 SLC35A1P78382 337 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 LRIF1Q5T3J3 769 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 BIVMQ86UB2 503 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 PERPQ96FX8 193 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 POM121Q96HA1 1249 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 ESRP2Q9H6T0 727 aaKnown RBP13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 BCL2L10Q9HD36 194 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 A4GALTQ9NPC4 353 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 NGBQ9NPG2 151 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 SLAMF8Q9P0V8 285 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 RNF115Q9Y4L5 304 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 GMEB1Q9Y692 573 aa13.95□□□□□ -0.18
LDLRAD3-205ENST00000532490 PDLIM1O00151 329 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 EIF1BO60739 113 aaKnown RBP13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 IGHV3-9P01782 118 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 INHBBP09529 407 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 UQCRBP14927 111 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 FADDQ13158 208 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 SLC17A1Q14916 467 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 LARS2Q15031 903 aaKnown RBP13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 PPA1Q15181 289 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 ZSWIM7Q19AV6 140 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 TIMM23BQ5SRD1 257 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 PRAMEF8Q5VWM4 474 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 PRAMEF7Q5VXH5 474 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 WBP2NLQ6ICG8 309 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 YTHDF3Q7Z739 585 aaKnown RBP13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 P2RY8Q86VZ1 359 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 C10orf111Q8N326 155 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 CIARTQ8N365 385 aaPredicted RBP13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 NEUROG1Q92886 237 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 MAL2Q969L2 176 aa13.94□□□□□ -0.18
LDLRAD3-205ENST00000532490 APH1AQ96BI3 265 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms