RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 NPIPB9F8W1W9 429 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 NDUFS8O00217 210 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 TBX19O60806 448 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 TRIM13O60858 407 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 AVPP01185 164 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 CELA3BP08861 270 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 OR4A8P0C604 315 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 BCKDHAP12694 445 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 DAOP14920 347 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 PRPH2P23942 346 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 MAPK1P28482 360 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 HPCAL1P37235 193 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 ASMTP46597 345 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 CCT3P49368 545 aaKnown RBP7.79□□□□□ -1.16
USF1-210ENST00000531842 CDH15P55291 814 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 SKP2Q13309 424 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 TP53BP2Q13625 1128 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 ADIPOQQ15848 244 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 PDLIM3Q53GG5 364 aaPredicted RBP7.79□□□□□ -1.16
USF1-210ENST00000531842 SLC25A53Q5H9E4 307 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 DCST2Q5T1A1 773 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 KANK2Q63ZY3 851 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 C1orf229Q6ZS94 237 aaPredicted RBP7.79□□□□□ -1.16
USF1-210ENST00000531842 TMPPEQ6ZT21 453 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 SVOPLQ8N434 492 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 RIBC1Q8N443 379 aaPredicted RBP7.79□□□□□ -1.16
USF1-210ENST00000531842 LINC01356Q8N9X3 169 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 OR7A2PQ8NGA2 310 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 OR5AK3PQ8NH89 298 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 ADAMTS15Q8TE58 950 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 GCDHQ92947 438 aaPredicted RBP7.79□□□□□ -1.16
USF1-210ENST00000531842 MTERF3Q96E29 417 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 ZNF764Q96H86 408 aaPredicted RBP7.79□□□□□ -1.16
USF1-210ENST00000531842 C3orf30Q96M34 536 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 USB1Q9BQ65 265 aaKnown RBP7.79□□□□□ -1.16
USF1-210ENST00000531842 C1QTNF5Q9BXJ0 243 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 TPK1Q9H3S4 243 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 SERHL2Q9H4I8 314 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 FKRPQ9H9S5 495 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 CTPS2Q9NRF8 586 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 MALT1Q9UDY8 824 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 PCDHGB1Q9Y5G3 927 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 ACTL7BQ9Y614 415 aa7.79□□□□□ -1.16
USF1-210ENST00000531842 TMEM89A2RUT3 159 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 LSM1O15116 133 aaKnown RBP7.78□□□□□ -1.16
USF1-210ENST00000531842 CFLARO15519 480 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 ITM2AO43736 263 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 FCMRO60667 390 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 PEX11AO75192 247 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 MRPL33O75394 65 aaKnown RBP7.78□□□□□ -1.16
USF1-210ENST00000531842 C1QCP02747 245 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 BPGMP07738 259 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 FGF4P08620 206 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 KRT16P08779 473 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 UBTFL6P0CB48 400 aaPredicted RBP7.78□□□□□ -1.16
USF1-210ENST00000531842 LAMP1P11279 417 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 UBL4AP11441 157 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 PGCP20142 388 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 RYKP34925 604 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 SERPINF1P36955 418 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 RPL3P39023 403 aaKnown RBP7.78□□□□□ -1.16
USF1-210ENST00000531842 FRKP42685 505 aaPredicted RBP7.78□□□□□ -1.16
USF1-210ENST00000531842 OR2B6P58173 313 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 SNRPD2P62316 118 aaKnown RBP7.78□□□□□ -1.16
USF1-210ENST00000531842 PLAURQ03405 335 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 PDE7AQ13946 482 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 GPR68Q15743 365 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 MAPK14Q16539 360 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 MSMPQ1L6U9 139 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 LSM12Q3MHD2 195 aaKnown RBP7.78□□□□□ -1.16
USF1-210ENST00000531842 SYT14P1Q58G82 188 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 C3orf33Q6P1S2 294 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 RNF165Q6ZSG1 346 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 MTERF4Q7Z6M4 381 aaKnown RBP7.78□□□□□ -1.16
USF1-210ENST00000531842 PEG10Q86TG7 708 aaKnown RBP7.78□□□□□ -1.16
USF1-210ENST00000531842 MTDHQ86UE4 582 aaKnown RBP7.78□□□□□ -1.16
USF1-210ENST00000531842 HOMEZQ8IX15 550 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 CDK20Q8IZL9 346 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 OR5W2Q8NH69 310 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 AGR3Q8TD06 166 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 TWIST2Q8WVJ9 160 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 OR5P2Q8WZ92 322 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 PKNOX2Q96KN3 472 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 PPP3R2Q96LZ3 170 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 STACQ99469 402 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 PRPF18Q99633 342 aaKnown RBP7.78□□□□□ -1.16
USF1-210ENST00000531842 ACTRT3Q9BYD9 372 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 PIGUQ9H490 435 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 ESM1Q9NQ30 184 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 DUSP22Q9NRW4 184 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 CA10Q9NS85 328 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 ATAD3AQ9NVI7 634 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 ZDHHC2Q9UIJ5 367 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 DTNAQ9Y4J8 743 aa7.78□□□□□ -1.16
USF1-210ENST00000531842 LOC105371242A0A075B767 164 aa7.77□□□□□ -1.17
USF1-210ENST00000531842 A0A096LPE4 126 aa7.77□□□□□ -1.17
USF1-210ENST00000531842 A0A1W2PPZ6 126 aa7.77□□□□□ -1.17
USF1-210ENST00000531842 TMEM129A0AVI4 362 aa7.77□□□□□ -1.17
USF1-210ENST00000531842 CLDN24A6NM45 220 aa7.77□□□□□ -1.17
USF1-210ENST00000531842 PIP5K1BO14986 540 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms