RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ELOA3Q8NG57 546 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 OR8J2Q8NGG1 315 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 FAM168AQ92567 244 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 CNOT9Q92600 299 aaKnown RBP16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 PKNOX2Q96KN3 472 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 KCNK17Q96T54 332 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 INPP5KQ9BT40 448 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 SAP130Q9H0E3 1048 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 AKTIPQ9H8T0 292 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 LGALS13Q9UHV8 139 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 CDC42EP3Q9UKI2 254 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 PCDHGB4Q9UN71 923 aa16.16■□□□□ 0.18
SSSCA1-206ENST00000531405 PRAMEF27A3QJZ7 478 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 H7C417 338 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 PDLIM1O00151 329 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 SCN2BO60939 215 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 ZNF16P17020 682 aaPredicted RBP16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 UQCRC2P22695 453 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 MAGEA8P43361 318 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 KCNJ10P78508 379 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 GPAT3Q53EU6 434 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 SAXO2Q658L1 398 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 OR7E24Q6IFN5 339 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 ARFGAP2Q8N6H7 521 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 C10orf105Q8TEF2 133 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 DPY30Q9C005 99 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 POLE3Q9NRF9 147 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 SLC7A10Q9NS82 523 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 TMEM181Q9P2C4 612 aa16.15■□□□□ 0.18
SSSCA1-206ENST00000531405 TMED7-TICAM2A0A0A6YYA0 188 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 TMEM72A0PK05 275 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 DNPH1O43598 174 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 AGR2O95994 175 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 GUSBP08236 651 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 IMPDH2P12268 514 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 SLC25A16P16260 332 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 KHKP50053 298 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 H3F3AP84243 136 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 TSPO2Q5TGU0 170 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 ZNF544Q6NX49 715 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 ZNF781Q8N8C0 355 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 BEX2Q9BXY8 128 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 EXOSC3Q9NQT5 275 aaKnown RBP16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 UPB1Q9UBR1 384 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 TMED7Q9Y3B3 224 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 FLVCR1Q9Y5Y0 555 aa16.14■□□□□ 0.17
SSSCA1-206ENST00000531405 PRSS51A0A1B0GVH4 220 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 ZC3H12DA2A288 527 aaKnown RBP16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 WDR91A4D1P6 747 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 ATP6V1G2-DDX39BF2Z307 99 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 NUDT17P0C025 328 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 IGHV4-31P0DP07 118 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 CHI3L1P36222 383 aaPredicted RBP16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 ETV4P43268 484 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 CLK1P49759 484 aaKnown RBP16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 IFFO1Q0D2I5 559 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 SMU1Q2TAY7 513 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 SPANXN4Q5MJ08 99 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 ARIH2OSQ8N7S6 290 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 OIT3Q8WWZ8 545 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 NEURL3Q96EH8 262 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 SLC35A5Q9BS91 424 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 AMBRA1Q9C0C7 1298 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 SLC17A5Q9NRA2 495 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 MARCOQ9UEW3 520 aaPredicted RBP16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 DCTN4Q9UJW0 460 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 OSGIN1Q9UJX0 560 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 TRAPPC4Q9Y296 219 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 SLC9A8Q9Y2E8 581 aa16.13■□□□□ 0.17
SSSCA1-206ENST00000531405 HMGN4O00479 90 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 TYROBPO43914 113 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 CDH2P19022 906 aaPredicted RBP16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 TACR3P29371 465 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 POLR2HP52434 150 aaKnown RBP16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 EFNA4P52798 201 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 SLC35A1P78382 337 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 HPCAP84074 193 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 CASP8Q14790 479 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 SYPL1Q16563 259 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 ANXA8L1Q5VT79 327 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 AP1ARQ63HQ0 302 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 CYB5R2Q6BCY4 276 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 NUDCD3Q8IVD9 361 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 ANKFN1Q8N957 763 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 DDIT4LQ96D03 193 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 C20orf27Q9GZN8 174 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 FKRPQ9H9S5 495 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 AMDHD2Q9Y303 409 aa16.12■□□□□ 0.17
SSSCA1-206ENST00000531405 CHRM4P08173 479 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 USF1P22415 310 aaPredicted RBP16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 FKBP2P26885 142 aaKnown RBP16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 APOBEC3AP31941 199 aaPredicted RBP16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 HTR3AP46098 478 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 SRSF2Q01130 221 aaKnown RBP16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 CHRNB3Q05901 458 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 SLC17A1Q14916 467 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 CHI3L2Q15782 390 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 KRTAP24-1Q3LI83 254 aa16.11■□□□□ 0.17
SSSCA1-206ENST00000531405 IL17RELQ6ZVW7 336 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms