RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TIFABQ6ZNK6 161 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 GLCCI1Q86VQ1 547 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 CLHC1Q8NHS4 586 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 ZNF563Q8TA94 476 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 NEU4Q8WWR8 484 aaPredicted RBP7.84□□□□□ -1.15
VPS11-203ENST00000529545 SNX18Q96RF0 628 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 NAA11Q9BSU3 229 aaPredicted RBP7.84□□□□□ -1.15
VPS11-203ENST00000529545 SOX7Q9BT81 388 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 KCNF1Q9H3M0 494 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 OBP2BQ9NPH6 170 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 ACER3Q9NUN7 267 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 CHRNA9Q9UGM1 479 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 BAIAP2L1Q9UHR4 511 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 HDGFL3Q9Y3E1 203 aa7.84□□□□□ -1.15
VPS11-203ENST00000529545 TENM1Q9UKZ4 2725 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 DUXAA6NLW8 204 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 B4DSR2 109 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 NPIPB8E9PQR5 432 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 NPIPB9F8W1W9 429 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 TRIM77I1YAP6 450 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 PDLIM1O00151 329 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 KLF11O14901 512 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 EIF1BO60739 113 aaKnown RBP7.83□□□□□ -1.16
VPS11-203ENST00000529545 KRT33AO76009 404 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 VENTXO95231 258 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 CHEK2O96017 543 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 AK1P00568 194 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 TACSTD2P09758 323 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 UBTFL6P0CB48 400 aaPredicted RBP7.83□□□□□ -1.16
VPS11-203ENST00000529545 NEFHP12036 1026 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 IFNGR1P15260 489 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 CDH2P19022 906 aaPredicted RBP7.83□□□□□ -1.16
VPS11-203ENST00000529545 CASQ1P31415 396 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 COMPP49747 757 aaPredicted RBP7.83□□□□□ -1.16
VPS11-203ENST00000529545 CDH15P55291 814 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 RPL38P63173 70 aaKnown RBP7.83□□□□□ -1.16
VPS11-203ENST00000529545 SKP2Q13309 424 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 GPR68Q15743 365 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 EFNB3Q15768 340 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 ZSWIM7Q19AV6 140 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 FRMD7Q6ZUT3 714 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 EIF3MQ7L2H7 374 aaKnown RBP7.83□□□□□ -1.16
VPS11-203ENST00000529545 ABHD12BQ7Z5M8 362 aaPredicted RBP7.83□□□□□ -1.16
VPS11-203ENST00000529545 CCDC103Q8IW40 242 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 HOMEZQ8IX15 550 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 TEX29Q8N6K0 151 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 NATD1Q8N6N6 113 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 OR4F15Q8NGB8 312 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 OR5P2Q8WZ92 322 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 MOAP1Q96BY2 351 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 ZNF524Q96C55 264 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 SLC38A2Q96QD8 506 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 JMJD8Q96S16 334 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 KATNB1Q9BVA0 655 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 NMUR2Q9GZQ4 415 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 SAP130Q9H0E3 1048 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 PLK3Q9H4B4 646 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 SLC7A10Q9NS82 523 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 SIRT3Q9NTG7 399 aaPredicted RBP7.83□□□□□ -1.16
VPS11-203ENST00000529545 TMEM181Q9P2C4 612 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 DCDC2Q9UHG0 476 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 TRAPPC4Q9Y296 219 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 TMED5Q9Y3A6 229 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 CCL27Q9Y4X3 112 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 KCNE3Q9Y6H6 103 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 MEGF8Q7Z7M0 2845 aa7.83□□□□□ -1.16
VPS11-203ENST00000529545 TMEM114B3SHH9 223 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 FAM157AC9JC47 383 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 CFLARO15519 480 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 DNAJA2O60884 412 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 STX11O75558 287 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 SLU7O95391 586 aaKnown RBP7.82□□□□□ -1.16
VPS11-203ENST00000529545 CD33P20138 364 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 MAPK1P28482 360 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 IL2RGP31785 369 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 NTF4P34130 210 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 UBE2NP61088 152 aaKnown RBP7.82□□□□□ -1.16
VPS11-203ENST00000529545 SLC35A1P78382 337 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 SLC25A3Q00325 362 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 LGALS3BPQ08380 585 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 ADIPOQQ15848 244 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 ZNF141Q15928 474 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 GALNTL6Q49A17 601 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 RFTN2Q52LD8 501 aaPredicted RBP7.82□□□□□ -1.16
VPS11-203ENST00000529545 TSPO2Q5TGU0 170 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 CLEC6AQ6EIG7 209 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 ZYG11AQ6WRX3 759 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 C1orf229Q6ZS94 237 aaPredicted RBP7.82□□□□□ -1.16
VPS11-203ENST00000529545 GRINAQ7Z429 371 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 CNPY4Q8N129 248 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 ZNF786Q8N393 782 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 POMGNT2Q8NAT1 580 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 SEMA6DQ8NFY4 1073 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 SFXN5Q8TD22 340 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 ACMSDQ8TDX5 336 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 UBASH3BQ8TF42 649 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 FAM216AQ8WUB2 273 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 WDR60Q8WVS4 1066 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 PMM1Q92871 262 aa7.82□□□□□ -1.16
VPS11-203ENST00000529545 DNAJA3Q96EY1 480 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms