RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SLC22A31A6NKX4 558 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 PRR23D1E9PI22 279 aaPredicted RBP10.79□□□□□ -0.68
USF1-208ENST00000528768 NPIPA7E9PJI5 369 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 NUDT21O43809 227 aaKnown RBP10.79□□□□□ -0.68
USF1-208ENST00000528768 PIP5K1CO60331 668 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 GPX5O75715 221 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 CSTAP01040 98 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 IL1AP01583 271 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 THY1P04216 161 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 NPIPA8P0DM63 369 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 PRR23D2P0DMB1 279 aaPredicted RBP10.79□□□□□ -0.68
USF1-208ENST00000528768 HPGDP15428 266 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 ZNF3P17036 446 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 HK1P19367 917 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 HTR2AP28223 471 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 CD1CP29017 333 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 RORAP35398 523 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 ETV5P41161 510 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 GABRA4P48169 554 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 SLC9A3P48764 834 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 ETV1P50549 477 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 PGDP52209 483 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 PSPHP78330 225 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 PSG6Q00889 435 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 POU4F2Q12837 409 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.79□□□□□ -0.68
USF1-208ENST00000528768 ALG10BQ5I7T1 473 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 ARHGAP11AQ6P4F7 1023 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 HSDL2Q6YN16 418 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 RTL4Q6ZR62 310 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 MEPCEQ7L2J0 689 aaKnown RBP10.79□□□□□ -0.68
USF1-208ENST00000528768 BCDIN3DQ7Z5W3 292 aaKnown RBP10.79□□□□□ -0.68
USF1-208ENST00000528768 VASH2Q86V25 355 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 LNX2Q8N448 690 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 SIMC1Q8NDZ2 872 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 DOK4Q8TEW6 326 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 CNOT9Q92600 299 aaKnown RBP10.79□□□□□ -0.68
USF1-208ENST00000528768 OTULINQ96BN8 352 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 MRPL48Q96GC5 212 aaKnown RBP10.79□□□□□ -0.68
USF1-208ENST00000528768 KCTD7Q96MP8 289 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 NDC1Q9BTX1 674 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 ENAMQ9NRM1 1142 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 ERVK-19Q9WJR5 959 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 GPR52Q9Y2T5 361 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 ARHGEF17Q96PE2 2063 aaPredicted RBP10.79□□□□□ -0.68
USF1-208ENST00000528768 A0A1B0GWA3 101 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 SERINC4A6NH21 518 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 STMND1H3BQB6 276 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 DSCR3O14972 297 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 HCRTR1O43613 425 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 UPK1BO75841 260 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 SNX4O95219 450 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 LYPD3O95274 346 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 CH25HO95992 272 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 APOA1P02647 267 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 PRG2P13727 222 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 GALP22466 123 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 SSTR4P31391 388 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 GABRA5P31644 462 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 SOX3P41225 446 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 SLC1A3P43003 542 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 RPS3AP61247 264 aaKnown RBP10.78□□□□□ -0.68
USF1-208ENST00000528768 LSM11P83369 360 aaKnown RBP eCLIP10.78□□□□□ -0.68
USF1-208ENST00000528768 MAT1AQ00266 395 aaKnown RBP10.78□□□□□ -0.68
USF1-208ENST00000528768 BDH1Q02338 343 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 LGALS3BPQ08380 585 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 ACSM1Q08AH1 577 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 SRSF6Q13247 344 aaKnown RBP10.78□□□□□ -0.68
USF1-208ENST00000528768 GPR50Q13585 617 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 TRAM1Q15629 374 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 LCN1P1Q5VSP4 162 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 LIPKQ5VXJ0 399 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 HLA-DQA1Q5Y7H0 255 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 OAFQ86UD1 273 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 MEX3DQ86XN8 651 aaKnown RBP10.78□□□□□ -0.68
USF1-208ENST00000528768 CPOQ8IVL8 374 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 SLC2A12Q8TD20 617 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 GRHL3Q8TE85 626 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 MIB2Q96AX9 1013 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 SGTBQ96EQ0 304 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 C1GALT1C1Q96EU7 318 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 PTCHD1Q96NR3 888 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 MED18Q9BUE0 208 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 CDADC1Q9BWV3 514 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 SLC19A3Q9BZV2 496 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 SPRTNQ9H040 489 aaPredicted RBP10.78□□□□□ -0.68
USF1-208ENST00000528768 CMC2Q9NRP2 79 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 FBXO34Q9NWN3 711 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 DNAJB12Q9NXW2 375 aaKnown RBP10.78□□□□□ -0.68
USF1-208ENST00000528768 KCNE5Q9UJ90 142 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 KLHL21Q9UJP4 597 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 CAB39Q9Y376 341 aaPredicted RBP10.78□□□□□ -0.68
USF1-208ENST00000528768 RNF215Q9Y6U7 377 aa10.78□□□□□ -0.68
USF1-208ENST00000528768 LRBAP50851 2863 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 IGHV5-51A0A0C4DH38 117 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 CENPVL1A0A0U1RR11 272 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 C17orf105B2RV13 164 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 SCDO00767 359 aa10.77□□□□□ -0.69
USF1-208ENST00000528768 CDC123O75794 336 aaPredicted RBP10.77□□□□□ -0.69
USF1-208ENST00000528768 AGFG2O95081 481 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms