RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 LBPP18428 481 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 MATN1P21941 496 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 PTAFRP25105 342 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 ELK4P28324 431 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 LSP1P33241 339 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 FRKP42685 505 aaPredicted RBP5.77□□□□□ -1.49
CD44-221ENST00000526000 MRPL19P49406 292 aaKnown RBP5.77□□□□□ -1.49
CD44-221ENST00000526000 EFNA4P52798 201 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 DSCR9P59020 149 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 TUBA1BP68363 451 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 TUBA4AP68366 448 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 SELENBP1Q13228 472 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 CBFBQ13951 182 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 GABRA6Q16445 453 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 DPY19L1Q2PZI1 675 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 ELOA3BQ3SY89 546 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 EXOSC6Q5RKV6 272 aaKnown RBP5.77□□□□□ -1.49
CD44-221ENST00000526000 METTL21CQ5VZV1 264 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 FBXW9Q5XUX1 488 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 ZCCHC12Q6PEW1 402 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 KLHL17Q6TDP4 642 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 EPGNQ6UW88 154 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 TUBA1AQ71U36 451 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 C6orf120Q7Z4R8 191 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 R3HCC1LQ7Z5L2 792 aaKnown RBP5.77□□□□□ -1.49
CD44-221ENST00000526000 SPATA19Q7Z5L4 167 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 MTDHQ86UE4 582 aaKnown RBP5.77□□□□□ -1.49
CD44-221ENST00000526000 ZNF527Q8NB42 609 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 TOR1AIP2Q8NFQ8 470 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 ELOA3Q8NG57 546 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 ZNF563Q8TA94 476 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 XAGE5Q8WWM1 108 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 OR5P2Q8WZ92 322 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 RAB8BQ92930 207 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 APH1AQ96BI3 265 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 TUBGCP3Q96CW5 907 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 ZG16BQ96DA0 208 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 MSI2Q96DH6 328 aaKnown RBP5.77□□□□□ -1.49
CD44-221ENST00000526000 MTERF3Q96E29 417 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 PPP1R36Q96LQ0 422 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 ZNF317Q96PQ6 595 aaPredicted RBP5.77□□□□□ -1.49
CD44-221ENST00000526000 STACQ99469 402 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 SDF2Q99470 211 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 INPP5KQ9BT40 448 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 SOX7Q9BT81 388 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 PRR14Q9BWN1 585 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 LAT2Q9GZY6 243 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 HOXD1Q9GZZ0 328 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 SLCO1B3Q9NPD5 702 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 DUSP22Q9NRW4 184 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 ACSS1Q9NUB1 689 aaPredicted RBP5.77□□□□□ -1.49
CD44-221ENST00000526000 PNPOQ9NVS9 261 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 ASB6Q9NWX5 421 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 NOP53Q9NZM5 478 aaKnown RBP5.77□□□□□ -1.49
CD44-221ENST00000526000 KLHL14Q9P2G3 628 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 UPB1Q9UBR1 384 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 ATP6V1HQ9UI12 483 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 KCNS2Q9ULS6 477 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 TRIM33Q9UPN9 1127 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 MGAT4BQ9UQ53 548 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 USH1CQ9Y6N9 552 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 PMF1-BGLAPU3KQ54 211 aa5.77□□□□□ -1.49
CD44-221ENST00000526000 NUP214P35658 2090 aaPredicted RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 SH3PXD2BA1X283 911 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 GMNCA6NCL1 334 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 ZNF724A8MTY0 619 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 ATP6V1G2-DDX39BF2Z307 99 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 NPIPB9F8W1W9 429 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 SDHDO14521 159 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 SCAMP2O15127 329 aaKnown RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 EIF4E2O60573 245 aaKnown RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 TBX19O60806 448 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 SHOX2O60902 331 aaPredicted RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 C1QCP02747 245 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 ITGA5P08648 1049 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 OR12D1P0DN82 309 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 IDO1P14902 403 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 LCN1P31025 176 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 APOBEC3AP31941 199 aaPredicted RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 SRP14P37108 136 aaKnown RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 IDH2P48735 452 aaKnown RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 GZMKP49863 264 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 PDLIM4P50479 330 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 ATP4BP51164 291 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 CLNS1AP54105 237 aaKnown RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 SLC25A3Q00325 362 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 CHRNB3Q05901 458 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 RUNX1T1Q06455 604 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 LGALS3BPQ08380 585 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 LRRC74AQ0VAA2 488 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 PDE7AQ13946 482 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 PTGR1Q14914 329 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 PDCD2Q16342 344 aaPredicted RBP5.76□□□□□ -1.49
CD44-221ENST00000526000 MAPK14Q16539 360 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 GSTA3Q16772 222 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 MST1LQ2TV78 715 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 CR1LQ2VPA4 569 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 HIKESHIQ53FT3 197 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 SYT14P1Q58G82 188 aa5.76□□□□□ -1.49
CD44-221ENST00000526000 SLC25A53Q5H9E4 307 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms