RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 COPS7AQ9UBW8 275 aa3.08□□□□□ -1.92
CD44-219ENST00000525685 OR12D3Q9UGF7 316 aa3.08□□□□□ -1.92
CD44-219ENST00000525685 PCSK1NQ9UHG2 260 aa3.08□□□□□ -1.92
CD44-219ENST00000525685 ERVW-1Q9UQF0 538 aa3.08□□□□□ -1.92
CD44-219ENST00000525685 OR51B4Q9Y5P0 310 aa3.08□□□□□ -1.92
CD44-219ENST00000525685 EML5Q05BV3 1969 aa3.08□□□□□ -1.92
CD44-219ENST00000525685 DOCK4Q8N1I0 1966 aa3.08□□□□□ -1.92
CD44-219ENST00000525685 FANCMQ8IYD8 2048 aa3.08□□□□□ -1.92
CD44-219ENST00000525685 PCNX3Q9H6A9 2034 aa3.08□□□□□ -1.92
CD44-219ENST00000525685 ZNF318Q5VUA4 2279 aa3.08□□□□□ -1.92
CD44-219ENST00000525685 PLXND1Q9Y4D7 1925 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 CHD5Q8TDI0 1954 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 SH3PXD2BA1X283 911 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 SRRM4A7MD48 611 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 RNF212BA8MTL3 300 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 ZNF724A8MTY0 619 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 WASH3PC4AMC7 463 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 K7EQG2 157 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 LRRTM2O43300 516 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 BUB1O43683 1085 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 MFSD11O43934 449 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 ZMPSTE24O75844 475 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 OR6B1O95007 311 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 TXNDC12O95881 172 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 CD160O95971 181 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 GSTA1P08263 222 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 HIST1H2AGP0C0S8 130 aaPredicted RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 POLR2EP19388 210 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 BCKDHBP21953 392 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 OR1E1P30953 314 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 HOXA6P31267 233 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 NBL1P41271 181 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 MARCKSL1P49006 195 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 PLK1P53350 603 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 HADHBP55084 474 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 CDH6P55285 790 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 TRA2BP62995 288 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 CCZ1BP86790 482 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 CCZ1P86791 482 aaPredicted RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 GNA12Q03113 381 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 MFGE8Q08431 387 aaPredicted RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 SRSF5Q13243 272 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 RIGQ13278 110 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 TSTA3Q13630 321 aaPredicted RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 DPYSQ14117 519 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 DPYSL3Q14195 570 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 MESDQ14696 234 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 SPA17Q15506 151 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 HNRNPA1L2Q32P51 320 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 DNAJC21Q5F1R6 531 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 ZNF506Q5JVG8 444 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 TCHHL1Q5QJ38 904 aaPredicted RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 RWDD4Q6NW29 188 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 C22orf39Q6P5X5 142 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 PSTKQ8IV42 348 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 SFRP1Q8N474 314 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 RTL3Q8N8U3 475 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 RELL2Q8NC24 303 aaPredicted RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 ZBTB44Q8NCP5 570 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 OR2T3Q8NH03 318 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 RNASE8Q8TDE3 154 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 HIST1H2ACQ93077 130 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 FAF2Q96CS3 445 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 CELF6Q96J87 481 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 CSPG4P5Q96PW8 444 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 FEM1AQ9BSK4 669 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 CCDC28BQ9BUN5 200 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 CXXC4Q9H2H0 198 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 GOLPH3Q9H4A6 298 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 LRRC19Q9H756 370 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 PDFQ9HBH1 243 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 PRSS16Q9NQE7 514 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 PNPLA3Q9NST1 481 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 CUTCQ9NTM9 273 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 TECRQ9NZ01 308 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 LCMT1Q9UIC8 334 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 MFHAS1Q9Y4C4 1052 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 HYOU1Q9Y4L1 999 aa3.07□□□□□ -1.92
CD44-219ENST00000525685 TNRC6BQ9UPQ9 1833 aaKnown RBP3.07□□□□□ -1.92
CD44-219ENST00000525685 MACROD2A1Z1Q3 448 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 BTNL10A8MVZ5 291 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 H0YHG0 523 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 K7ERQ8 282 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 PSTPIP1O43586 416 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 KDELR3O43731 214 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 SPOPO43791 374 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 GPRIN2O60269 458 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 E2F6O75461 281 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 BAG2O95816 211 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 FCGR3AP08637 254 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 SERPINF2P08697 491 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 KRT7P08729 469 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 IL4RP24394 825 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 P2RY2P41231 377 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 SLC1A1P43005 524 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 PSMD8P48556 350 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 HCAR3P49019 387 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 GSK3BP49841 420 aa3.06□□□□□ -1.92
CD44-219ENST00000525685 METAP1P53582 386 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms