RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 PLA2G12BQ9BX93 195 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 PANK2Q9BZ23 570 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 SLITRK2Q9H156 845 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 SLC25A51Q9H1U9 297 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 PIGUQ9H490 435 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 GDF3Q9NR23 364 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 THSD1Q9NS62 852 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 RNF186Q9NXI6 227 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 SIGLEC8Q9NYZ4 499 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 LAMP3Q9UQV4 416 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 SLC6A5Q9Y345 797 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 CACNG2Q9Y698 323 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 CDH10Q9Y6N8 788 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 V9GYQ6 96 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 MAP3K1Q13233 1512 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 ASXL1Q8IXJ9 1541 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 NALCNQ8IZF0 1738 aa3.98□□□□□ -1.77
CD44-213ENST00000525209 CDK12Q9NYV4 1490 aaPredicted RBP3.98□□□□□ -1.77
CD44-213ENST00000525209 USP42Q9H9J4 1324 aaKnown RBP3.97□□□□□ -1.77
CD44-213ENST00000525209 BLMP54132 1417 aaPredicted RBP3.97□□□□□ -1.77
CD44-213ENST00000525209 ADGRL3Q9HAR2 1447 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 SLIT1O75093 1534 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 DUOX2Q9NRD8 1548 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 EIF2AK4Q9P2K8 1649 aaKnown RBP3.97□□□□□ -1.77
CD44-213ENST00000525209 A0A0G2JLL6 359 aaPredicted RBP3.97□□□□□ -1.77
CD44-213ENST00000525209 FAM74A7A6NL05 159 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 BLOC1S5-TXNDC5H3BN57 136 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 RHODO00212 210 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 PFKFB2O60825 505 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 BMP10O95393 424 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 TSPAN13O95857 204 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 F10P00742 488 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 IGHG3P01860 377 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 APOHP02749 345 aaPredicted RBP3.97□□□□□ -1.77
CD44-213ENST00000525209 HMGN1P05114 100 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 GIMD1P0DJR0 217 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 ADORA3P0DMS8 318 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 ACP2P11117 423 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 NPR2P20594 1047 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 CMA1P23946 247 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 IVDP26440 423 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 ALDH3A1P30838 453 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 CALCRP30988 508 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 CX3CR1P49238 355 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 RGS6P49758 472 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 CDH12P55289 794 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 TMPRSS3P57727 454 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 PAX2Q02962 417 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 BNIP2Q12982 314 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 NAB1Q13506 487 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 ITGA9Q13797 1035 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 SF3B4Q15427 424 aaKnown RBP eCLIP3.97□□□□□ -1.77
CD44-213ENST00000525209 OR4D1Q15615 310 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 TSC22D1Q15714 1073 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 KLHL38Q2WGJ6 581 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 COX19Q49B96 90 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 FAM74A3Q4VXF1 159 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 TP53I3Q53FA7 332 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 AWAT1Q58HT5 328 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 PLPP4Q5VZY2 271 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 DHRS11Q6UWP2 260 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 GDPD4Q6W3E5 623 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 C3P1Q6ZMU1 363 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 MBOAT1Q6ZNC8 495 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 Q6ZSR3 168 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 LANCL3Q6ZV70 420 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 SETD3Q86TU7 594 aaPredicted RBP3.97□□□□□ -1.77
CD44-213ENST00000525209 TAC4Q86UU9 113 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 TMEM139Q8IV31 216 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 GID4Q8IVV7 300 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 GSPT2Q8IYD1 628 aaKnown RBP3.97□□□□□ -1.77
CD44-213ENST00000525209 RCOR2Q8IZ40 523 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 SPAG16Q8N0X2 631 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 CENPSQ8N2Z9 138 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 TRAM1L1Q8N609 369 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 LRTM2Q8N967 370 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 OR10A7Q8NGE5 316 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 OR13C5Q8NGS8 318 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 OR6N2Q8NGY6 317 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 PLPPR1Q8TBJ4 325 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 CD99L2Q8TCZ2 262 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 MZB1Q8WU39 189 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 SLC35F5Q8WV83 523 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 ISOC2Q96AB3 205 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 OR5B2Q96R09 309 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 CNN2Q99439 309 aaKnown RBP3.97□□□□□ -1.77
CD44-213ENST00000525209 MAPKAP1Q9BPZ7 522 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 ECSITQ9BQ95 431 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 DCUN1D5Q9BTE7 237 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 OR51M1Q9H341 326 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 CPVLQ9H3G5 476 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 IKZF5Q9H5V7 419 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 POPDC2Q9HBU9 364 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 VCX3AQ9NNX9 186 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 FAM53CQ9NYF3 392 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 MAT2BQ9NZL9 334 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 KLRF1Q9NZS2 232 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 ZNF221Q9UK13 617 aa3.97□□□□□ -1.77
CD44-213ENST00000525209 CLEC4EQ9ULY5 219 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms