RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 EML6Q6ZMW3 1958 aa4.12□□□□□ -1.75
CHMP4A-202ENST00000524955 CHD6Q8TD26 2715 aa4.12□□□□□ -1.75
CHMP4A-202ENST00000524955 EXPH5Q8NEV8 1989 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 A0A087WUJ7 227 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 A0A0B4J2E0 115 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 A0A1B0GX12 115 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 A0A1W2PNV4 684 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 TCRBV5S2A0A599 114 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 TRAPPC13A5PLN9 417 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 CD8B2A6NJW9 211 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 EEF1E1-BLOC1S5C9J1V9 151 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 C11orf98E9PRG8 122 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 C19orf84I3L1E1 186 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ETV2O00321 342 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 SYT5O00445 386 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 FAAHO00519 579 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ACOT8O14734 319 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ADAMDEC1O15204 470 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 EEF1E1O43324 174 aaKnown RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 DNAJC8O75937 253 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 AHSA1O95433 338 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 CH25HO95992 272 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 PLGP00747 810 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 IFNA14P01570 189 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 IL2RAP01589 272 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 IGHV3-9P01782 118 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 IFNW1P05000 195 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 C8BP07358 591 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 HLA-DOBP13765 273 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 GABRA1P14867 456 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 UQCRBP14927 111 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ELK4P28324 431 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ADH6P28332 368 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 IDUAP35475 653 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 UGT2B15P54855 530 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 RPS3AP61247 264 aaKnown RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 LTBQ06643 244 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 LGALS3BPQ08380 585 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 DBPQ10586 325 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 TRIM25Q14258 630 aaKnown RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 TSC22D1Q15714 1073 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 BCL2A1Q16548 175 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ZNF239Q16600 458 aaKnown RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 EXOC3L2Q2M3D2 409 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 FGD3Q5JSP0 725 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 PDSS1Q5T2R2 415 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 C1orf140Q5VVS0 124 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ALKBH2Q6NS38 261 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ULK3Q6PHR2 472 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 TMPPEQ6ZT21 453 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 CCDC121Q6ZUS5 278 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ESPNLQ6ZVH7 1005 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 FCRLAQ7L513 359 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 BTLAQ7Z6A9 289 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ADGRE4PQ86SQ3 457 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 SPATA24Q86W54 205 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 DHFR2Q86XF0 187 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 WDFY1Q8IWB7 410 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 MCEMP1Q8IX19 187 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 TUSC5Q8IXB3 177 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 FAM26EQ8N5C1 309 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 TMEM99Q8N816 258 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 LSMEM1Q8N8F7 131 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 RELL2Q8NC24 303 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 BHLHE22Q8NFJ8 381 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ZPLD1Q8TCW7 415 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 SSC4DQ8WTU2 575 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 CA5BP1Q8WTZ4 195 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 PHF10Q8WUB8 498 aaKnown RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 GEMIN6Q8WXD5 167 aaKnown RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 SLC38A4Q969I6 547 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 UTP4Q969X6 686 aaKnown RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 MCUR1Q96AQ8 359 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 DDIT4LQ96D03 193 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 DTNBP1Q96EV8 351 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 SLC47A1Q96FL8 570 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 PYURFQ96I23 114 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 LRGUKQ96M69 825 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 MOGAT1Q96PD6 335 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 PRSS27Q9BQR3 290 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 PTDSS2Q9BVG9 487 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 FNDC11Q9BVV2 318 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 TRIM2Q9C040 744 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 MEPEQ9NQ76 525 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 VNN3Q9NY84 501 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 SELENONQ9NZV5 590 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 C6orf203Q9P0P8 240 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 SLC7A8Q9UHI5 535 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 MAGEL2Q9UJ55 1249 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 RPS6KA6Q9UK32 745 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 A4GNTQ9UNA3 340 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 AURKCQ9UQB9 309 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 SLC9A8Q9Y2E8 581 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 AP3M1Q9Y2T2 418 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 BSNQ9UPA5 3926 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 CFAP46Q8IYW2 2715 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 KIAA1549Q9HCM3 1950 aa4.11□□□□□ -1.75
CHMP4A-202ENST00000524955 ZNF462Q96JM2 2506 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 TRBV4-1A0A0J9YWV2 114 aa4.1□□□□□ -1.75
CHMP4A-202ENST00000524955 MBD3L4A6NDZ8 208 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms