RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 BHLHE40O14503 412 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 GNB5O14775 395 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 ARPC3O15145 178 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 TRIM3O75382 744 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-212ENST00000524330 COX6A1P12074 109 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 CD36P16671 472 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 OTX2P32243 289 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 EIF1P41567 113 aaKnown RBP9.1□□□□□ -0.95
VPS13B-212ENST00000524330 MASP1P48740 699 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 GP2P55259 537 aaKnown RBP9.1□□□□□ -0.95
VPS13B-212ENST00000524330 FBXW4P57775 412 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 RPS7P62081 194 aaKnown RBP9.1□□□□□ -0.95
VPS13B-212ENST00000524330 ACTC1P68032 377 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 ACTA1P68133 377 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 EFNB1P98172 346 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 PLAURQ03405 335 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 ZNF74Q16587 644 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 NTRK2Q16620 822 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 COL28A1Q2UY09 1125 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 EMC4Q5J8M3 183 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 HES3Q5TGS1 186 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 GPR139Q6DWJ6 353 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 LCN10Q6JVE6 187 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 JMJD6Q6NYC1 403 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-212ENST00000524330 TMEM81Q6P7N7 255 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 FAM199XQ6PEV8 388 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-212ENST00000524330 APOOLQ6UXV4 268 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 MEPCEQ7L2J0 689 aaKnown RBP9.1□□□□□ -0.95
VPS13B-212ENST00000524330 JAZF1Q86VZ6 243 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 MEX3DQ86XN8 651 aaKnown RBP9.1□□□□□ -0.95
VPS13B-212ENST00000524330 CPOQ8IVL8 374 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 TMEM156Q8N614 296 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 ZNF248Q8NDW4 579 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 NLGN4YQ8NFZ3 816 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-212ENST00000524330 OR4K17Q8NGC6 315 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 GPR119Q8TDV5 335 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 CT55Q8WUE5 264 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 DDIT4LQ96D03 193 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 IMMP1LQ96LU5 166 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 ERMAPQ96PL5 475 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-212ENST00000524330 CPNE5Q9HCH3 593 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 ISYNA1Q9NPH2 558 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 TIMMDC1Q9NPL8 285 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 ABI3Q9P2A4 366 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 SEC14L4Q9UDX3 406 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 TEKT2Q9UIF3 430 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 TCFL5Q9UL49 500 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 TMED7Q9Y3B3 224 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 HS3ST3B1Q9Y662 390 aa9.1□□□□□ -0.95
VPS13B-212ENST00000524330 ASCC3Q8N3C0 2202 aaKnown RBP9.09□□□□□ -0.95
VPS13B-212ENST00000524330 UNC80Q8N2C7 3258 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 IGLV3-32A0A0A0MS00 114 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 TMEM129A0AVI4 362 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 H3BMQ9 156 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 CCRL2O00421 344 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 PRKNO60260 465 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-212ENST00000524330 SUSD5O60279 629 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 KLF7O75840 302 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-212ENST00000524330 OR2J2O76002 312 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 GABARAPO95166 117 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 NADKO95544 446 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-212ENST00000524330 PPP1R3DO95685 299 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 RENP00797 406 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 UMODP07911 640 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 TSPAN19P0C672 248 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 HSMCR30P0CW71 290 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 ADORA3P0DMS8 318 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 RBMS1P29558 406 aaKnown RBP9.09□□□□□ -0.95
VPS13B-212ENST00000524330 C21orf33P30042 268 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-212ENST00000524330 ETV5P41161 510 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 CENPAP49450 140 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 TUBA1BP68363 451 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 LSM11P83369 360 aaKnown RBP eCLIP9.09□□□□□ -0.95
VPS13B-212ENST00000524330 LSAMPQ13449 338 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 DNASE1L3Q13609 305 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 SPHARQ15513 63 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 DGUOKQ16854 277 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 KLHL12Q53G59 568 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 ARMCX4Q5H9R4 360 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 SLC35D3Q5M8T2 416 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 AADACL4Q5VUY2 407 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 CBLN3Q6UW01 205 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 GDPGP1Q6ZNW5 385 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 TUBA1AQ71U36 451 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 RPS19BP1Q86WX3 136 aaKnown RBP9.09□□□□□ -0.95
VPS13B-212ENST00000524330 KLHL36Q8N4N3 616 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 KBTBD8Q8NFY9 601 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 OR11G2Q8NGC1 345 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 OR52I1Q8NGK6 324 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 OR5M3Q8NGP4 307 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 ZFAND2BQ8WV99 257 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 SGCDQ92629 289 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 KIAA1143Q96AT1 154 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-212ENST00000524330 LGALS12Q96DT0 336 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 YIPF6Q96EC8 236 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 RNF31Q96EP0 1072 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 MRGPRX4Q96LA9 322 aa9.09□□□□□ -0.95
VPS13B-212ENST00000524330 SGCZQ96LD1 299 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms