RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 ZHX1-C8orf76Q96EF9 292 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 CCDC28BQ9BUN5 200 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 RSPO3Q9BXY4 272 aaPredicted RBP16.53■□□□□ 0.24
SPIDR-220ENST00000522900 CALML5Q9NZT1 146 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 CCDC167Q9P0B6 97 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 TRAPPC4Q9Y296 219 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 NOSIPQ9Y314 301 aaKnown RBP16.53■□□□□ 0.24
SPIDR-220ENST00000522900 A0A096LPI6 279 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 A0A0G2JPF8 293 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 HNRNPCL2B2RXH8 293 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 HNRNPCL3B7ZW38 293 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 ZNF208O43345 1280 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 HNRNPCL1O60812 293 aaKnown RBP16.52■□□□□ 0.24
SPIDR-220ENST00000522900 HNRNPCL4P0DMR1 293 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 BNIP2Q12982 314 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 C20orf204Q6ZNR8 217 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 HDXQ7Z353 690 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 ZNF440Q8IYI8 595 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 C10orf111Q8N326 155 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 CADM2Q8N3J6 435 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 PIGXQ8TBF5 258 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 DYDC1Q8WWB3 177 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 IGFBPL1Q8WX77 278 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 DDIT4LQ96D03 193 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 THOC1Q96FV9 657 aaKnown RBP16.52■□□□□ 0.24
SPIDR-220ENST00000522900 EMC3Q9P0I2 261 aa16.52■□□□□ 0.24
SPIDR-220ENST00000522900 DPRXA6NFQ7 191 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 NR5A2O00482 541 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 DNPH1O43598 174 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 FOXG1P55316 489 aaPredicted RBP16.51■□□□□ 0.23
SPIDR-220ENST00000522900 HOXC5Q00444 222 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 CAPRIN1Q14444 709 aaKnown RBP16.51■□□□□ 0.23
SPIDR-220ENST00000522900 NCMAPQ5T1S8 102 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 LRIF1Q5T3J3 769 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 SHEQ5VZ18 495 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 FBXW9Q5XUX1 488 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 P3H2Q8IVL5 708 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 AKAP1Q92667 903 aaKnown RBP eCLIP16.51■□□□□ 0.23
SPIDR-220ENST00000522900 NEUROG1Q92886 237 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 SPDL1Q96EA4 605 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 PERPQ96FX8 193 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 SMR3AQ99954 134 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 SPATA9Q9BWV2 254 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 A4GALTQ9NPC4 353 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 INTS9Q9NV88 658 aaKnown RBP16.51■□□□□ 0.23
SPIDR-220ENST00000522900 THUMPD1Q9NXG2 353 aaKnown RBP16.51■□□□□ 0.23
SPIDR-220ENST00000522900 ZNF232Q9UNY5 417 aa16.51■□□□□ 0.23
SPIDR-220ENST00000522900 SETD2Q9BYW2 2564 aaPredicted RBP16.5■□□□□ 0.23
SPIDR-220ENST00000522900 ZNF469Q96JG9 3925 aaPredicted RBP16.5■□□□□ 0.23
SPIDR-220ENST00000522900 MTORP42345 2549 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 FREM1Q5H8C1 2179 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 PRR14LQ5THK1 2151 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 HS3ST1O14792 307 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 THBS1P07996 1170 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 BMP2P12643 396 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 UQCRBP14927 111 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 FOSL1P15407 271 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 H2AFXP16104 143 aaPredicted RBP16.5■□□□□ 0.23
SPIDR-220ENST00000522900 COX5AP20674 150 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 CXCR1P25024 350 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 ADSLP30566 484 aaPredicted RBP16.5■□□□□ 0.23
SPIDR-220ENST00000522900 SLC16A1P53985 500 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 SLC35A1P78382 337 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 CEACAM7Q14002 265 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 LARS2Q15031 903 aaKnown RBP16.5■□□□□ 0.23
SPIDR-220ENST00000522900 STK11Q15831 433 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 AGKQ53H12 422 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 ZNF311Q5JNZ3 666 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 Q5PR19 223 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 RNF220Q5VTB9 566 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 SERPINA11Q86U17 422 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 LRRC75A-AS1Q8N1F1 130 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 UBE2J2Q8N2K1 259 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 ZNF433Q8N7K0 673 aaPredicted RBP16.5■□□□□ 0.23
SPIDR-220ENST00000522900 GOLGA6L1Q8N7Z2 621 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 CKAP2Q8WWK9 683 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 APH1AQ96BI3 265 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 POTEKPQ9BYX7 375 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 VAPAQ9P0L0 249 aa16.5■□□□□ 0.23
SPIDR-220ENST00000522900 HMGB1P1B2RPK0 211 aaPredicted RBP16.49■□□□□ 0.23
SPIDR-220ENST00000522900 GPR171O14626 319 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 CLOCKO15516 846 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 ARHGEF9O43307 516 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 FRS3O43559 492 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 MRPL33O75394 65 aaKnown RBP16.49■□□□□ 0.23
SPIDR-220ENST00000522900 PGM3O95394 542 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 SLC17A1Q14916 467 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 WBP2NLQ6ICG8 309 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 TMEM99Q8N816 258 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 ZNF611Q8N823 705 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 NAA11Q9BSU3 229 aaPredicted RBP16.49■□□□□ 0.23
SPIDR-220ENST00000522900 BCL2L10Q9HD36 194 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 IFT52Q9Y366 437 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 RNF115Q9Y4L5 304 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 VPS13CQ709C8 3753 aa16.49■□□□□ 0.23
SPIDR-220ENST00000522900 RAI1Q7Z5J4 1906 aaPredicted RBP16.49■□□□□ 0.23
SPIDR-220ENST00000522900 ACANP16112 2415 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 TRBV5-3A0A0A0MS03 114 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 TMEM247A6NEH6 219 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 LIPT2A6NK58 231 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms