RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 SLC16A1P53985 500 aa18.33■□□□□ 0.52
PABPC1-218ENST00000521865 CLNS1AP54105 237 aaKnown RBP18.33■□□□□ 0.52
PABPC1-218ENST00000521865 GABRA6Q16445 453 aa18.33■□□□□ 0.52
PABPC1-218ENST00000521865 CHRFAM7AQ494W8 412 aa18.33■□□□□ 0.52
PABPC1-218ENST00000521865 CNOT9Q92600 299 aaKnown RBP18.33■□□□□ 0.52
PABPC1-218ENST00000521865 TESCQ96BS2 214 aa18.33■□□□□ 0.52
PABPC1-218ENST00000521865 NAA11Q9BSU3 229 aaPredicted RBP18.33■□□□□ 0.52
PABPC1-218ENST00000521865 NUF2Q9BZD4 464 aa18.33■□□□□ 0.52
PABPC1-218ENST00000521865 PARPBPQ9NWS1 579 aa18.33■□□□□ 0.52
PABPC1-218ENST00000521865 RAP2CQ9Y3L5 183 aa18.33■□□□□ 0.52
PABPC1-218ENST00000521865 ATP23Q9Y6H3 246 aa18.33■□□□□ 0.52
PABPC1-218ENST00000521865 SONP18583 2426 aaKnown RBP18.33■□□□□ 0.52
PABPC1-218ENST00000521865 FBN1P35555 2871 aaKnown RBP18.32■□□□□ 0.52
PABPC1-218ENST00000521865 ATRQ13535 2644 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 TMED7-TICAM2A0A0A6YYA0 188 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 AP3D1O14617 1153 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 EIF1BO60739 113 aaKnown RBP18.32■□□□□ 0.52
PABPC1-218ENST00000521865 LBPP18428 481 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 S100A3P33764 101 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 NTF4P34130 210 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 POLR2HP52434 150 aaKnown RBP18.32■□□□□ 0.52
PABPC1-218ENST00000521865 FOXG1P55316 489 aaPredicted RBP18.32■□□□□ 0.52
PABPC1-218ENST00000521865 NME5P56597 212 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 DSCR9P59020 149 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 PHC1P78364 1004 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 SLC35A1P78382 337 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 GNA13Q14344 377 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 CASP8Q14790 479 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 DPY19L1Q2PZI1 675 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 KRT71Q3SY84 523 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 FAM174BQ3ZCQ3 159 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 C11orf71Q6IPW1 123 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 RNF130Q86XS8 419 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 TRIML2Q8N7C3 387 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 MUS81Q96NY9 551 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 INPP5KQ9BT40 448 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 TRAPPC4Q9Y296 219 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 SLC9A8Q9Y2E8 581 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 TMED7Q9Y3B3 224 aa18.32■□□□□ 0.52
PABPC1-218ENST00000521865 COL6A5A8TX70 2615 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 E9PBE3 544 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 HMGN4O00479 90 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 ITGA5P08648 1049 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 BMP4P12644 408 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 UQCRBP14927 111 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 TACR3P29371 465 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 SLC1A6P48664 564 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 ANXA11P50995 505 aaKnown RBP18.31■□□□□ 0.52
PABPC1-218ENST00000521865 SYPL1Q16563 259 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 B3GLCTQ6Y288 498 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 ANKFN1Q8N957 763 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 PMM1Q92871 262 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 PANX1Q96RD7 426 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 FKRPQ9H9S5 495 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 OSGIN1Q9UJX0 560 aa18.31■□□□□ 0.52
PABPC1-218ENST00000521865 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.31■□□□□ 0.52
PABPC1-218ENST00000521865 TMEM72A0PK05 275 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 PRAMEF27A3QJZ7 478 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 BIRC5O15392 142 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 RGS16O15492 202 aaPredicted RBP18.3■□□□□ 0.52
PABPC1-218ENST00000521865 IL7RP16871 459 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 TGFBR3Q03167 851 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 CHRNB3Q05901 458 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 ZNF544Q6NX49 715 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 LSRQ86X29 649 aaPredicted RBP18.3■□□□□ 0.52
PABPC1-218ENST00000521865 CMIPQ8IY22 773 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 ZNF525Q8N782 197 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 OR10H5Q8NGA6 315 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 AENQ8WTP8 325 aaKnown RBP18.3■□□□□ 0.52
PABPC1-218ENST00000521865 WDR60Q8WVS4 1066 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 TRNT1Q96Q11 434 aaKnown RBP18.3■□□□□ 0.52
PABPC1-218ENST00000521865 C20orf27Q9GZN8 174 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 SLC7A10Q9NS82 523 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 AMDHD2Q9Y303 409 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 FLVCR1Q9Y5Y0 555 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 NUP214P35658 2090 aaPredicted RBP18.3■□□□□ 0.52
PABPC1-218ENST00000521865 CHD3Q12873 2000 aaKnown RBP18.3■□□□□ 0.52
PABPC1-218ENST00000521865 CADP27708 2225 aa18.3■□□□□ 0.52
PABPC1-218ENST00000521865 CCDC154A6NI56 674 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 ZNF208O43345 1280 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 SNUPNO95149 360 aaKnown RBP18.29■□□□□ 0.52
PABPC1-218ENST00000521865 C1QCP02747 245 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 NR2F1P10589 423 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 CDH2P19022 906 aaPredicted RBP18.29■□□□□ 0.52
PABPC1-218ENST00000521865 H3F3AP84243 136 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 PLAURQ03405 335 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 TMEM249Q2WGJ8 235 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 C6orf52Q5T4I8 152 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 TSPO2Q5TGU0 170 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 KLHL24Q6TFL4 600 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 ZNF621Q6ZSS3 439 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 KIRREL3Q8IZU9 778 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 C17orf78Q8N4C9 275 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 FAM168AQ92567 244 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 CCDC115Q96NT0 180 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 TNFRSF13CQ96RJ3 184 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 MANSC1Q9H8J5 431 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 BTNL2Q9UIR0 455 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 DCTN4Q9UJW0 460 aa18.29■□□□□ 0.52
PABPC1-218ENST00000521865 PMF1-BGLAPU3KQ54 211 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms