RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 MERTKQ12866 999 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 FOXD4Q12950 439 aaPredicted RBP7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 KCNAB2Q13303 367 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 SKP2Q13309 424 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 OR1Q1Q15612 314 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 CD226Q15762 336 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 TBC1D25Q3MII6 688 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 ZIK1Q3SY52 487 aaPredicted RBP7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 SLC36A3Q495N2 470 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 PODNL1Q6PEZ8 512 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 ETV3LQ6ZN32 361 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 USP51Q70EK9 711 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 GDF7Q7Z4P5 450 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 MRGPREQ86SM8 312 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 TAGAPQ8N103 731 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 Q8N1Y9 231 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 ZNF614Q8N883 585 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 POGLUT1Q8NBL1 392 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 OR9Q2Q8NGE9 314 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 SLC7A13Q8TCU3 470 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 NR4A3Q92570 626 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 ZNF524Q96C55 264 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 SDCCAG3Q96C92 435 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 CNBD2Q96M20 576 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 CCDC140Q96MF4 163 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 RDH12Q96NR8 316 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 KLHDC3Q9BQ90 382 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 PRSS27Q9BQR3 290 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 ADI1Q9BV57 179 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 DEFB126Q9BYW3 111 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 POLR2J2Q9GZM3 115 aaKnown RBP7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 POLR2J3Q9H1A7 115 aaKnown RBP7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 TOR3AQ9H497 397 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 PLGRKTQ9HBL7 147 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 ZBTB20Q9HC78 741 aaPredicted RBP7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 ZNF160Q9HCG1 818 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 CTPS2Q9NRF8 586 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 P4HTMQ9NXG6 502 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 IL17BQ9UHF5 180 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 FBXL4Q9UKA2 621 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 SLC35A3Q9Y2D2 325 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 PCDHGB5Q9Y5G0 923 aa7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 MRPS18BQ9Y676 258 aaKnown RBP7.16□□□□□ -1.26
CTHRC1-203ENST00000520337 MED12Q93074 2177 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 A0A087WUU8 490 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 A0A1B0GVG6 124 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 A0A1W2PQD3 144 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 TRAPPC13A5PLN9 417 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 TRIM64A6NGJ6 449 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 C17orf51A8MQB3 221 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 C22orf46C9J442 243 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 H0YAE9 185 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 FAAHO00519 579 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 SCDO00767 359 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 AP3D1O14617 1153 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 PFDN1O60925 122 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 OR6B1O95007 311 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 CCNB2O95067 398 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 GASTP01350 101 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 GNAO1P09471 354 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 ITGAMP11215 1152 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 ANXA8P13928 327 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 IGFBP5P24593 272 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 EPHA2P29317 976 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 EVI2BP34910 448 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 KRT20P35900 424 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 CAPGP40121 348 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 RANBP1P43487 201 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 GAS1P54826 345 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 NRG3P56975 720 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 MLF1P58340 268 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 ST3GAL3Q11203 375 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 EPS8Q12929 822 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 CHAF1BQ13112 559 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 EFR3AQ14156 821 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 RTP5Q14D33 572 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 TRAM2Q15035 370 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 TESK1Q15569 626 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 TGIF1Q15583 401 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 ZNF791Q3KP31 576 aaPredicted RBP7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 ZBED5Q49AG3 693 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 FGD3Q5JSP0 725 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 DCST1Q5T197 706 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 KRT80Q6KB66 452 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 H3F3CQ6NXT2 135 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 PGBD2Q6P3X8 592 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 ZNF613Q6PF04 617 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 CBLN3Q6UW01 205 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 WDR88Q6ZMY6 472 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 PLEKHM3Q6ZWE6 761 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 SPATC1Q76KD6 591 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 ZNF550Q7Z398 422 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 NUP54Q7Z3B4 507 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 ZER1Q7Z7L7 766 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 GALNT5Q7Z7M9 940 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 MARCH3Q86UD3 253 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 RANBP3LQ86VV4 465 aaPredicted RBP7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 NKAIN4Q8IVV8 208 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 DHRSXQ8N5I4 330 aa7.15□□□□□ -1.26
CTHRC1-203ENST00000520337 SLC15A4Q8N697 577 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms