RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	EXO1	Q9UQ84	846 aa	Known RBP	6.27	□□□□□ -1.41
SDCBP-208	ENST00000520228	MRPS33	Q9Y291	106 aa	Known RBP	6.27	□□□□□ -1.41
SDCBP-208	ENST00000520228	BOD1L1	Q8NFC6	3051 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228		A0A0G2JPF8	293 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228		A0A1W2PQ09	198 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	HNRNPCL3	B7ZW38	293 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228		G3V2L1	256 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	RTCA	O00442	366 aa	Known RBP	6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	HS3ST1	O14792	307 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	PLIN3	O60664	434 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	DPM1	O60762	260 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	SCEL	O95171	688 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	UQCRH	P07919	91 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	HNRNPCL4	P0DMR1	293 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	HIST1H1T	P22492	207 aa	Predicted RBP	6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	TSFM	P43897	325 aa	Known RBP	6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	ARFIP1	P53367	373 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	NAGLU	P54802	743 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	LIM2	P55344	173 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	HSD17B7	P56937	341 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	RAB38	P57729	211 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	REL	Q04864	619 aa	Predicted RBP	6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	LCP2	Q13094	533 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	SLAMF1	Q13291	335 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	CUL3	Q13618	768 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	EXT1	Q16394	746 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	GGTA1P	Q4G0N0	100 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	SFT2D3	Q587I9	215 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	CFAP157	Q5JU67	520 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	OR4C11	Q6IEV9	310 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	IGFL3	Q6UXB1	125 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	GPRIN3	Q6ZVF9	776 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZNF595	Q8IYB9	648 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZADH2	Q8N4Q0	377 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	CCDC63	Q8NA47	563 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	WDR20	Q8TBZ3	569 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	RDH11	Q8TC12	318 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	TSLP	Q969D9	159 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	L3HYPDH	Q96EM0	354 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	IMMP1L	Q96LU5	166 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	TMEM237	Q96Q45	408 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZNF382	Q96SR6	550 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	SERPINI1	Q99574	410 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	LPAR4	Q99677	370 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	GFI1	Q99684	422 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	TMEM109	Q9BVC6	243 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	IQCG	Q9H095	443 aa	Known RBP	6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	SLCO5A1	Q9H2Y9	848 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	UBTD1	Q9HAC8	227 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	LYRM4	Q9HD34	91 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	KLHL1	Q9NR64	748 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	ANAPC2	Q9UJX6	822 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	SNX6	Q9UNH7	406 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	VDAC3	Q9Y277	283 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	STK38L	Q9Y2H1	464 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	MMACHC	Q9Y4U1	282 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	PCDHGB1	Q9Y5G3	927 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	SPACA6	W5XKT8	324 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	SPTB	P11277	2137 aa		6.26	□□□□□ -1.41
SDCBP-208	ENST00000520228	SEC16A	O15027	2179 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	SETX	Q7Z333	2677 aa	Known RBP	6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	SAA2-SAA4	A0A096LPE2	208 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	IGKV3D-11	A0A0A0MRZ8	115 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228		A8MUI8	341 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	HNRNPCL2	B2RXH8	293 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	MANBA	O00462	879 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	PLPP1	O14494	284 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	RGS16	O15492	202 aa	Predicted RBP	6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	PLPP2	O43688	288 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	CTNS	O60931	367 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	MITF	O75030	526 aa	Predicted RBP	6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	ERLIN1	O75477	346 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	EED	O75530	441 aa	Known RBP	6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	TSPAN9	O75954	239 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	OR4F21	O95013	312 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	SEMA3D	O95025	777 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	ETHE1	O95571	254 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	KRT6A	P02538	564 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	KRT6B	P04259	564 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	CPN2	P22792	545 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	TLX1	P31314	330 aa	Predicted RBP	6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	KRT6C	P48668	564 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	HNRNPF	P52597	415 aa	Known RBP	6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	PKNOX1	P55347	436 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	DNAJB13	P59910	316 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	NAA20	P61599	178 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	RUNX1T1	Q06455	604 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	MFAP5	Q13361	173 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	KRT71	Q3SY84	523 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	NADK2	Q4G0N4	442 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	ISLR2	Q6UXK2	745 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	LINC00696	Q6ZRV3	163 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	GPR180	Q86V85	440 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	ZCCHC7	Q8N3Z6	543 aa	Known RBP	6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	BANP	Q8N9N5	519 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	M1AP	Q8TC57	530 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	SELENOM	Q8WWX9	145 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	PSMF1	Q92530	271 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	DACH2	Q96NX9	599 aa		6.25	□□□□□ -1.41
SDCBP-208	ENST00000520228	SMC6	Q96SB8	1091 aa		6.25	□□□□□ -1.41

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