RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 TGFBR2P37173 567 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 ID4P47928 161 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 COPZ1P61923 177 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 PSPHP78330 225 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 CHAF1BQ13112 559 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 FHL1Q13642 323 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 CTF1Q16619 201 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 B3GNTL1Q67FW5 361 aaPredicted RBP13.2□□□□□ -0.3
CLN8-204ENST00000519254 THSD4Q6ZMP0 1018 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 RPS19BP1Q86WX3 136 aaKnown RBP13.2□□□□□ -0.3
CLN8-204ENST00000519254 OR2T33Q8NG76 320 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 KCNE4Q8WWG9 221 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 PRRG3Q9BZD7 231 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 LAT2Q9GZY6 243 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLN8-204ENST00000519254 ICAM5Q9UMF0 924 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 DCHS1Q96JQ0 3298 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 A0A1W2PQD3 144 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 OR6C70A6NIJ9 312 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 ARGFXA6NJG6 315 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 KDM4EB2RXH2 506 aaPredicted RBP13.19□□□□□ -0.3
CLN8-204ENST00000519254 BHLHE40O14503 412 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 SPTBN2O15020 2390 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 RCBTB2O95199 551 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 SLC2A10O95528 541 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 HMGN1P05114 100 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 SAGP10523 405 aaPredicted RBP13.19□□□□□ -0.3
CLN8-204ENST00000519254 CCNA2P20248 432 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 NR4A1P22736 598 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 ITGA3P26006 1051 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 LIPAP38571 399 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 PLA2G5P39877 138 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 SOX3P41225 446 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 TMED10P49755 219 aaKnown RBP13.19□□□□□ -0.3
CLN8-204ENST00000519254 GAS1P54826 345 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 AQP6Q13520 282 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 WBP2NLQ6ICG8 309 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 MARCH3Q86UD3 253 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 CLEC1AQ8NC01 280 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 ANKK1Q8NFD2 765 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 C9orf43Q8TAL5 461 aaPredicted RBP13.19□□□□□ -0.3
CLN8-204ENST00000519254 CRELD1Q96HD1 420 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 TMEM80Q96HE8 168 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 DCUN1D5Q9BTE7 237 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 MED17Q9NVC6 651 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 MSRB2Q9Y3D2 182 aa13.19□□□□□ -0.3
CLN8-204ENST00000519254 TRAV27A0A087WT01 109 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 C17orf51A8MQB3 221 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 ALG1L2C9J202 215 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 KLK10O43240 276 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 PRODHO43272 600 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 TLX3O43711 291 aaPredicted RBP13.18□□□□□ -0.3
CLN8-204ENST00000519254 SCO2O43819 266 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 GABARAPO95166 117 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 MST1P26927 711 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 SSR4P51571 173 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 MLF1P58340 268 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 ZNF117Q03924 483 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 CRYZQ08257 329 aaKnown RBP13.18□□□□□ -0.3
CLN8-204ENST00000519254 NFATC3Q12968 1075 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 EFR3AQ14156 821 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 DOC2BQ14184 412 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 TIGD6Q17RP2 521 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 AADACL4Q5VUY2 407 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 RPL13AP3Q6NVV1 102 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 SMARCD3Q6STE5 483 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 LNX2Q8N448 690 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 ASB15Q8WXK1 588 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 FER1L6-AS2Q96M78 137 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 TNFRSF13CQ96RJ3 184 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 TEX12Q9BXU0 123 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 TBL1XR1Q9BZK7 514 aa13.18□□□□□ -0.3
CLN8-204ENST00000519254 MRPS18AQ9NVS2 196 aaKnown RBP13.18□□□□□ -0.3
CLN8-204ENST00000519254 YARS2Q9Y2Z4 477 aaKnown RBP13.18□□□□□ -0.3
CLN8-204ENST00000519254 IGKV1D-42A0A075B6H8 117 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 ADAM10O14672 748 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 GMFGO60234 142 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 FADS1O60427 444 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 HCN1O60741 890 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 FBXO45P0C2W1 286 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 EVI2BP34910 448 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 GRK5P34947 590 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 CCR4P51679 360 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 SH3BGRP55822 239 aaPredicted RBP13.17□□□□□ -0.3
CLN8-204ENST00000519254 AIMP2Q13155 320 aaKnown RBP13.17□□□□□ -0.3
CLN8-204ENST00000519254 RNLSQ5VYX0 342 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 LYPD8Q6UX82 237 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 IL20RBQ6UXL0 311 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 ATG4DQ86TL0 474 aaPredicted RBP13.17□□□□□ -0.3
CLN8-204ENST00000519254 CYP4Z2PQ8N1L4 340 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 TMEM156Q8N614 296 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 TMCO5AQ8N6Q1 288 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 OR10G3Q8NGC4 313 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 OR52L1Q8NGH7 329 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 OR52I1Q8NGK6 324 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 OR51A7Q8NH64 312 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 ZFAND2BQ8WV99 257 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 LGALS12Q96DT0 336 aa13.17□□□□□ -0.3
CLN8-204ENST00000519254 SPACA9Q96E40 222 aaPredicted RBP13.17□□□□□ -0.3
CLN8-204ENST00000519254 PLEKHA8Q96JA3 519 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms