RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 MRGPRX4Q96LA9 322 aa13.69□□□□□ -0.22
TRAPPC9-205ENST00000518839 IFT27Q9BW83 186 aa13.69□□□□□ -0.22
TRAPPC9-205ENST00000518839 ANGPTL4Q9BY76 406 aa13.69□□□□□ -0.22
TRAPPC9-205ENST00000518839 FKRPQ9H9S5 495 aa13.69□□□□□ -0.22
TRAPPC9-205ENST00000518839 SH2D2AQ9NP31 389 aa13.69□□□□□ -0.22
TRAPPC9-205ENST00000518839 NANSQ9NR45 359 aa13.69□□□□□ -0.22
TRAPPC9-205ENST00000518839 PAK1IP1Q9NWT1 392 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC9-205ENST00000518839 ZNF229Q9UJW7 825 aa13.69□□□□□ -0.22
TRAPPC9-205ENST00000518839 TMED7Q9Y3B3 224 aa13.69□□□□□ -0.22
TRAPPC9-205ENST00000518839 CPAMD8Q8IZJ3 1885 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 MUC6Q6W4X9 2439 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 TRAV27A0A087WT01 109 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 A0A087WZY1 265 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 M0R129 80 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 PRODHO43272 600 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 GMFGO60234 142 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 SUSD5O60279 629 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 ENTPD6O75354 484 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 SNX4O95219 450 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 IFNGP01579 166 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 HIST1H2ABP04908 130 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 CDK1P06493 297 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 FXYD6P3P58550 94 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 ACER2Q5QJU3 275 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 FCRLBQ6BAA4 426 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 HIST3H2AQ7L7L0 130 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 SATL1Q86VE3 508 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 STX19Q8N4C7 294 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 C10orf53Q8N6V4 93 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 FADS6Q8N9I5 356 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 OR2M3Q8NG83 312 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 C9orf43Q8TAL5 461 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 FCGR1BQ92637 280 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 GGHQ92820 318 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 HIST1H2ACQ93077 130 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 THOC3Q96J01 351 aaKnown RBP13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 LRR1Q96L50 414 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 TNFRSF13CQ96RJ3 184 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 SIGLEC11Q96RL6 698 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 MCCC2Q9HCC0 563 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 MED11Q9P086 117 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 ERVK-18Q9QC07 812 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 CDV3Q9UKY7 258 aaKnown RBP13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 SLC6A5Q9Y345 797 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 SPIN1Q9Y657 262 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 MRPS18BQ9Y676 258 aaKnown RBP13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 VPS13AQ96RL7 3174 aa13.68□□□□□ -0.22
TRAPPC9-205ENST00000518839 DOCK10Q96BY6 2186 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 KDM4EB2RXH2 506 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 ZNF208O43345 1280 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 IDH3BO43837 385 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 OR2T1O43869 369 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 AHSA1O95433 338 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 P04436 131 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 HTR1AP08908 422 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 HK1P19367 917 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 FKBP2P26885 142 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 ADH6P28332 368 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 CASRP41180 1078 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 EIF1P41567 113 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 SLC15A1P46059 708 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 NUDT6P53370 316 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 RRADP55042 308 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 RPS4XP62701 263 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 EGR4Q05215 589 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 TUBA3CQ13748 450 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 MFSD13AQ14CX5 517 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 KLHL22Q53GT1 634 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 SYT14P1Q58G82 188 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 DCAF10Q5QP82 559 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 BICRALQ6AI39 1079 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 DPY19L2P2Q6ZN68 376 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 MAMDC2Q7Z304 686 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 ADGRG3Q86Y34 549 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 PLCZ1Q86YW0 608 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 GID4Q8IVV7 300 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 ANKK1Q8NFD2 765 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 FGF11Q92914 225 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 NTNG2Q96CW9 530 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 TMEM41AQ96HV5 264 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 ZNF582Q96NG8 517 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 GPX7Q96SL4 187 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 PHOX2BQ99453 314 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 LHPPQ9H008 270 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 CMC2Q9NRP2 79 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 SERINC1Q9NRX5 453 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 DNAJC27Q9NZQ0 273 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 H2AFY2Q9P0M6 372 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 CHRNA9Q9UGM1 479 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 IL17BQ9UHF5 180 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 KLHL21Q9UJP4 597 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 HIF3AQ9Y2N7 669 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 PCSK5Q92824 1860 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 EML6Q6ZMW3 1958 aa13.67□□□□□ -0.22
TRAPPC9-205ENST00000518839 TMEM72A0PK05 275 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 C2orf72A6NCS6 295 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 RIIAD1A6NNX1 92 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 C17orf51A8MQB3 221 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 SNPHO15079 494 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms