RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 ZNF311Q5JNZ3 666 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 SZRD1Q7Z422 152 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 TREML1Q86YW5 311 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 CREG2Q8IUH2 290 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 ZCCHC24Q8N2G6 241 aaKnown RBP8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 TMCO5AQ8N6Q1 288 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 GIMAP5Q96F15 307 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 ZNF764Q96H86 408 aaPredicted RBP8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 ZNF416Q9BWM5 594 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 TRIM31Q9BZY9 425 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 TREM2Q9NZC2 230 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 ZNF225Q9UK10 706 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 DTNAQ9Y4J8 743 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 CORINQ9Y5Q5 1042 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 ARPC4-TTLL3A0A0A6YYG9 625 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 A0A1B0GUS0 222 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 SH3PXD2BA1X283 911 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 LYNX1G3V0Z9 82 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 PPP6CO00743 305 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 KLF11O14901 512 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 PDPK1O15530 556 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 EIF1BO60739 113 aaKnown RBP8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 LYNX1P0DP58 116 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 TFPIP10646 304 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 UBL4AP11441 157 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 THBS4P35443 961 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 HSD17B3P37058 310 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 APOBEC1P41238 236 aaKnown RBP8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 CCR4P51679 360 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 LMO4P61968 165 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 CLCQ05315 142 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 CALCOCO2Q13137 446 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 SPDYAQ5MJ70 313 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 CCNJQ5T5M9 372 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 TSPO2Q5TGU0 170 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 ZNF551Q7Z340 670 aaPredicted RBP8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 KLHL7Q8IXQ5 586 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 MNS1Q8NEH6 495 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 IL17RDQ8NFM7 739 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 RFWD2Q8NHY2 731 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 MAGEE2Q8TD90 523 aaPredicted RBP8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 SLC25A28Q96A46 364 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 RAB39BQ96DA2 213 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 ZNF382Q96SR6 550 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 TMPRSS13Q9BYE2 586 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 VPS11Q9H270 941 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 PIGUQ9H490 435 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 NARFLQ9H6Q4 476 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 ACSS1Q9NUB1 689 aaPredicted RBP8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 GRHL1Q9NZI5 618 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 TRAPPC4Q9Y296 219 aa8.49□□□□□ -1.05
SH2D4A-202ENST00000518040 TMEM129A0AVI4 362 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 M0QZ24 198 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 M0R233 179 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 OIP5O43482 229 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 SYNGR3O43761 229 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 DNAJA2O60884 412 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 MPZL1O95297 269 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 IGLV1-44P01699 117 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 ENO1P06733 434 aaKnown RBP8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 CECR9P0C854 216 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 SESN3P58005 492 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 BTKQ06187 659 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 MERTKQ12866 999 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 TBRG1Q3YBR2 411 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 HIKESHIQ53FT3 197 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 ELFN2Q5R3F8 820 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 EXOSC6Q5RKV6 272 aaKnown RBP8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 DCAF12L2Q5VW00 463 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 SAXO2Q658L1 398 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 GPRIN3Q6ZVF9 776 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 DOK3Q7L591 496 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 ADGRG3Q86Y34 549 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 RIBC1Q8N443 379 aaPredicted RBP8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 JADE3Q92613 823 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 TMEM45BQ96B21 275 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 CHMP6Q96FZ7 201 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 MRPL57Q9BQC6 102 aaKnown RBP8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 NAA11Q9BSU3 229 aaPredicted RBP8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 PIF1Q9H611 641 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 RRAGDQ9NQL2 400 aaPredicted RBP8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 OXSMQ9NWU1 459 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 CMAHPQ9Y471 501 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 FLVCR1Q9Y5Y0 555 aa8.48□□□□□ -1.05
SH2D4A-202ENST00000518040 NBEAL2Q6ZNJ1 2754 aa8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 OR6C65A6NJZ3 312 aa8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 CCDC188H7C350 402 aa8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 PPIHO43447 177 aaKnown RBP8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 KRT33AO76009 404 aa8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 IGKV3-15P01624 115 aa8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 GSNP06396 782 aa8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 RNASE1P07998 156 aaKnown RBP8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 KRT16P08779 473 aa8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 NUDT17P0C025 328 aa8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 CDH2P19022 906 aaPredicted RBP8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 TSPAN8P19075 237 aa8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 H3F3AP84243 136 aa8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 ZP4Q12836 540 aa8.47□□□□□ -1.05
SH2D4A-202ENST00000518040 MMEL1Q495T6 779 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms