RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 EIF3MQ7L2H7 374 aaKnown RBP9.97□□□□□ -0.81
TRAPPC9-203ENST00000517667 ABHD12BQ7Z5M8 362 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC9-203ENST00000517667 ZNF786Q8N393 782 aa9.97□□□□□ -0.81
TRAPPC9-203ENST00000517667 TEX29Q8N6K0 151 aa9.97□□□□□ -0.81
TRAPPC9-203ENST00000517667 MOAP1Q96BY2 351 aa9.97□□□□□ -0.81
TRAPPC9-203ENST00000517667 JMJD8Q96S16 334 aa9.97□□□□□ -0.81
TRAPPC9-203ENST00000517667 CCDC106Q9BWC9 280 aa9.97□□□□□ -0.81
TRAPPC9-203ENST00000517667 RBM4Q9BWF3 364 aaKnown RBP9.97□□□□□ -0.81
TRAPPC9-203ENST00000517667 SLC7A10Q9NS82 523 aa9.97□□□□□ -0.81
TRAPPC9-203ENST00000517667 TRAPPC4Q9Y296 219 aa9.97□□□□□ -0.81
TRAPPC9-203ENST00000517667 FLVCR1Q9Y5Y0 555 aa9.97□□□□□ -0.81
TRAPPC9-203ENST00000517667 A0A087WUV0 522 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 IGHV1-18A0A0C4DH31 117 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 EXOC1LA0A1B0GW35 172 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 CYP7B1O75881 506 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 AK1P00568 194 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 CSTAP01040 98 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 LIMS1P48059 325 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 CCT3P49368 545 aaKnown RBP9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 HILS1P60008 231 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 VSNL1P62760 191 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 RPL38P63173 70 aaKnown RBP9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 H3F3AP84243 136 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 RIN1Q13671 783 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 ZNF141Q15928 474 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 C3orf36Q3SXR2 165 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 SPDYE7PQ495Y7 208 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 TSPO2Q5TGU0 170 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 GRINAQ7Z429 371 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 CCDC103Q8IW40 242 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 CNPY4Q8N129 248 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 POMGNT2Q8NAT1 580 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 OR4F15Q8NGB8 312 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 PSMA8Q8TAA3 256 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 SFXN5Q8TD22 340 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 WDR60Q8WVS4 1066 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 OIT3Q8WWZ8 545 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 IFT81Q8WYA0 676 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 ARL5BQ96KC2 179 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 ZNF317Q96PQ6 595 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 GPATCH2Q9NW75 528 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 TMEM181Q9P2C4 612 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 PCDHB10Q9UN67 800 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 GRIP1Q9Y3R0 1128 aa9.96□□□□□ -0.82
TRAPPC9-203ENST00000517667 DUXAA6NLW8 204 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 UBTFL6P0CB48 400 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 MYL2P10916 166 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 IFNGR1P15260 489 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 EFNA1P20827 205 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 SLC35A1P78382 337 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 SLC7A5Q01650 507 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 CCNIQ14094 377 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 GPR68Q15743 365 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 HIKESHIQ53FT3 197 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 PDLIM3Q53GG5 364 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 CFAP157Q5JU67 520 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 VHLLQ6RSH7 139 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 RNF165Q6ZSG1 346 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 PEG10Q86TG7 708 aaKnown RBP9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 HOMEZQ8IX15 550 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 NATD1Q8N6N6 113 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 NUP37Q8NFH4 326 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 CLHC1Q8NHS4 586 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 ZNF563Q8TA94 476 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 ACMSDQ8TDX5 336 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 UBASH3BQ8TF42 649 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 OR5P2Q8WZ92 322 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 TMEM45BQ96B21 275 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 SDF2Q99470 211 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 FMO2Q99518 471 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 NAA11Q9BSU3 229 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 ZNF442Q9H7R0 627 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 CTPS2Q9NRF8 586 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 ATAD3AQ9NVI7 634 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 TMEM45AQ9NWC5 275 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 BAIAP2L1Q9UHR4 511 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 PCDHGB4Q9UN71 923 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 SLC35A3Q9Y2D2 325 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 SPEF1Q9Y4P9 236 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 KCNE3Q9Y6H6 103 aa9.95□□□□□ -0.82
TRAPPC9-203ENST00000517667 TMEM114B3SHH9 223 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 hCG_2039718K7EN88 272 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 KLF11O14901 512 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 SCAMP2O15127 329 aaKnown RBP9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 STX11O75558 287 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 UGT2B17O75795 530 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 CHEK2O96017 543 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 CDH2P19022 906 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 HTR3AP46098 478 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 OR2B6P58173 313 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 UBE2NP61088 152 aaKnown RBP9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 NAAAQ02083 359 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 SLC17A1Q14916 467 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 TRIP10Q15642 601 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 LSM12Q3MHD2 195 aaKnown RBP9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 RFTN2Q52LD8 501 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 HSP90B2PQ58FF3 399 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 FAM71CQ8NEG0 241 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 TMEM186Q96B77 213 aa9.94□□□□□ -0.82
TRAPPC9-203ENST00000517667 DDIT4LQ96D03 193 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms