RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 GKN3PP0CG01 181 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 IGHV1-2P23083 117 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 IDH3AP50213 366 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 SLC35A1P78382 337 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 H3F3AP84243 136 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 RPS26P11Q5JNZ5 115 aaPredicted RBP17.29■□□□□ 0.36
DDR1-280ENST00000515881 NCMAPQ5T1S8 102 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 RNF220Q5VTB9 566 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 PRSS57Q6UWY2 283 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 SEZ6L2Q6UXD5 910 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 LSRQ86X29 649 aaPredicted RBP17.29■□□□□ 0.36
DDR1-280ENST00000515881 CCDC103Q8IW40 242 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 ZNF611Q8N823 705 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 APH1AQ96BI3 265 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 EBF4Q9BQW3 602 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 GSX2Q9BZM3 304 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 ADAM19Q9H013 955 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 ESRP2Q9H6T0 727 aaKnown RBP17.29■□□□□ 0.36
DDR1-280ENST00000515881 PRDM4Q9UKN5 801 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 ZNF443Q9Y2A4 671 aaPredicted RBP17.29■□□□□ 0.36
DDR1-280ENST00000515881 RNF115Q9Y4L5 304 aa17.29■□□□□ 0.36
DDR1-280ENST00000515881 NF1P21359 2839 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 A0A0G2JPF8 293 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 ZC3H12DA2A288 527 aaKnown RBP17.28■□□□□ 0.36
DDR1-280ENST00000515881 HNRNPCL2B2RXH8 293 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 HNRNPCL3B7ZW38 293 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 EIF1BO60739 113 aaKnown RBP17.28■□□□□ 0.36
DDR1-280ENST00000515881 HNRNPCL1O60812 293 aaKnown RBP17.28■□□□□ 0.36
DDR1-280ENST00000515881 IGHV3-9P01782 118 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 THBS1P07996 1170 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 HNRNPCL4P0DMR1 293 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 IMPDH2P12268 514 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 HOXB9P17482 250 aaPredicted RBP17.28■□□□□ 0.36
DDR1-280ENST00000515881 ACAA2P42765 397 aaKnown RBP17.28■□□□□ 0.36
DDR1-280ENST00000515881 LARS2Q15031 903 aaKnown RBP17.28■□□□□ 0.36
DDR1-280ENST00000515881 RGNQ15493 299 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 STK11Q15831 433 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 ZSWIM7Q19AV6 140 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 FBXW9Q5XUX1 488 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 ADAM5Q6NVV9 412 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 YTHDF3Q7Z739 585 aaKnown RBP17.28■□□□□ 0.36
DDR1-280ENST00000515881 ATG4DQ86TL0 474 aaPredicted RBP17.28■□□□□ 0.36
DDR1-280ENST00000515881 TMEM171Q8WVE6 324 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 AKAP1Q92667 903 aaKnown RBP eCLIP17.28■□□□□ 0.36
DDR1-280ENST00000515881 CCDC28BQ9BUN5 200 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 RAD21L1Q9H4I0 556 aa17.28■□□□□ 0.36
DDR1-280ENST00000515881 CACYBPQ9HB71 228 aaKnown RBP17.28■□□□□ 0.36
DDR1-280ENST00000515881 MAP1AP78559 2803 aaPredicted RBP17.27■□□□□ 0.36
DDR1-280ENST00000515881 A0A096LPI6 279 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 CLIC1O00299 241 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 CLOCKO15516 846 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 CD3EP07766 207 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 INHBBP09529 407 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 NUDT7P0C024 238 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 GGT1P19440 569 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 NTF4P34130 210 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 PTH2RP49190 550 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 PPA1Q15181 289 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 BLOC1S3Q6QNY0 202 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 BIVMQ86UB2 503 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 FUNDC1Q8IVP5 155 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 UBE2J2Q8N2K1 259 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 CLIP4Q8N3C7 705 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 GOLGA6L1Q8N7Z2 621 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 LILRB1Q8NHL6 650 aaPredicted RBP17.27■□□□□ 0.36
DDR1-280ENST00000515881 NAA11Q9BSU3 229 aaPredicted RBP17.27■□□□□ 0.36
DDR1-280ENST00000515881 SPATA9Q9BWV2 254 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 A4GALTQ9NPC4 353 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 ZNF232Q9UNY5 417 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 CHST2Q9Y4C5 530 aa17.27■□□□□ 0.36
DDR1-280ENST00000515881 FLNAP21333 2647 aaKnown RBP17.27■□□□□ 0.35
DDR1-280ENST00000515881 RAI1Q7Z5J4 1906 aaPredicted RBP17.27■□□□□ 0.35
DDR1-280ENST00000515881 ACANP16112 2415 aa17.27■□□□□ 0.35
DDR1-280ENST00000515881 TMCC2O75069 709 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 MRPL33O75394 65 aaKnown RBP17.26■□□□□ 0.35
DDR1-280ENST00000515881 PGM3O95394 542 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 BMP2P12643 396 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 PRG2P13727 222 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 CXCR1P25024 350 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 ADSLP30566 484 aaPredicted RBP17.26■□□□□ 0.35
DDR1-280ENST00000515881 IDUAP35475 653 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 AQP5P55064 265 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 COPZ1P61923 177 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 BSPH1Q075Z2 132 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 FADDQ13158 208 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 TIMM23BQ5SRD1 257 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 PRAMEF8Q5VWM4 474 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 PRAMEF7Q5VXH5 474 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 WBP2NLQ6ICG8 309 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 PAQR6Q6TCH4 344 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 SSX8Q7RTT4 187 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 P2RY8Q86VZ1 359 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 CADM2Q8N3J6 435 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 ZNF433Q8N7K0 673 aaPredicted RBP17.26■□□□□ 0.35
DDR1-280ENST00000515881 DYDC1Q8WWB3 177 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 MAL2Q969L2 176 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 MUCL1Q96DR8 90 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 Q96MF0 132 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 CXorf56Q9H5V9 222 aa17.26■□□□□ 0.35
DDR1-280ENST00000515881 ARMC7Q9H6L4 198 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms