RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 APOBEC3AP31941 199 aaPredicted RBP13.18□□□□□ -0.3
DDR1-278ENST00000515233 RYKP34925 604 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 HTR3AP46098 478 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 EFNA4P52798 201 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 CASP9P55211 416 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 CHRNB3Q05901 458 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 ATAD3BQ5T9A4 648 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 CYB5R2Q6BCY4 276 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 EMBQ6PCB8 327 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 C17orf78Q8N4C9 275 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 C1orf162Q8NEQ5 155 aaPredicted RBP13.18□□□□□ -0.3
DDR1-278ENST00000515233 OR52E4Q8NGH9 312 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 XAGE5Q8WWM1 108 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 HTRA1Q92743 480 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 ROPN1LQ96C74 230 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 ZG16BQ96DA0 208 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 BOD1Q96IK1 185 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 FKRPQ9H9S5 495 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.18□□□□□ -0.3
DDR1-278ENST00000515233 AMDHD2Q9Y303 409 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 PMF1-BGLAPU3KQ54 211 aa13.18□□□□□ -0.3
DDR1-278ENST00000515233 PRSS51A0A1B0GVH4 220 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 NUDT17P0C025 328 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 IGHV4-31P0DP07 118 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 MAP2K6P52564 334 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 TGFBR3Q03167 851 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 PLAURQ03405 335 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 FRRS1Q6ZNA5 592 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 ARFGAP2Q8N6H7 521 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 VPS37AQ8NEZ2 397 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 OR4A15Q8NGL6 344 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 PMM1Q92871 262 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 C1QTNF6Q9BXI9 259 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 OR11A1Q9GZK7 315 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 MANSC1Q9H8J5 431 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 SLC17A5Q9NRA2 495 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 SLC7A10Q9NS82 523 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 UPB1Q9UBR1 384 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 SLC9A8Q9Y2E8 581 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 FLVCR1Q9Y5Y0 555 aa13.17□□□□□ -0.3
DDR1-278ENST00000515233 ZNF208O43345 1280 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 SPAG7O75391 227 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 BPGMP07738 259 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 USF1P22415 310 aaPredicted RBP13.16□□□□□ -0.3
DDR1-278ENST00000515233 IDH2P48735 452 aaKnown RBP13.16□□□□□ -0.3
DDR1-278ENST00000515233 OR2B6P58173 313 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 PHC1P78364 1004 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 SLC35A1P78382 337 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 LSM11P83369 360 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDR1-278ENST00000515233 FUT5Q11128 374 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 SLC17A1Q14916 467 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 SWI5Q1ZZU3 235 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 ANXA8L1Q5VT79 327 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 SAXO2Q658L1 398 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 RAB8BQ92930 207 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 DDIT4LQ96D03 193 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 DNAJA3Q96EY1 480 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 NAA11Q9BSU3 229 aaPredicted RBP13.16□□□□□ -0.3
DDR1-278ENST00000515233 SHARPINQ9H0F6 387 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 LGALS13Q9UHV8 139 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 ATP23Q9Y6H3 246 aa13.16□□□□□ -0.3
DDR1-278ENST00000515233 TMED7-TICAM2A0A0A6YYA0 188 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 PRAMEF27A3QJZ7 478 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 CLDN24A6NM45 220 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 VWC2LB2RUY7 222 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 LMX1BO60663 402 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 IMPDH2P12268 514 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 MPGP29372 298 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 ETV4P43268 484 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 PRPS1P60891 318 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 CASP8Q14790 479 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 MST1LQ2TV78 715 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 TSPO2Q5TGU0 170 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 TNFAIP8L2Q6P589 184 aaPredicted RBP13.15□□□□□ -0.3
DDR1-278ENST00000515233 CASP12Q6UXS9 341 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 CMIPQ8IY22 773 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 TESCQ96BS2 214 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 NEURL3Q96EH8 262 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 ROPN1BQ9BZX4 212 aaPredicted RBP13.15□□□□□ -0.3
DDR1-278ENST00000515233 DPY30Q9C005 99 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 AKTIPQ9H8T0 292 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 ROPN1Q9HAT0 212 aaPredicted RBP13.15□□□□□ -0.3
DDR1-278ENST00000515233 OSGIN1Q9UJX0 560 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 PRDM4Q9UKN5 801 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 TMED7Q9Y3B3 224 aa13.15□□□□□ -0.3
DDR1-278ENST00000515233 ARFGEF3Q5TH69 2177 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 NDUFS8O00217 210 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 FAAHO00519 579 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 WNT11O96014 354 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 CCNA2P20248 432 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 GZMKP49863 264 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 POLR2HP52434 150 aaKnown RBP13.14□□□□□ -0.31
DDR1-278ENST00000515233 SLC25A3Q00325 362 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 KRTAP24-1Q3LI83 254 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 GPAT3Q53EU6 434 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 C9orf135Q5VTT2 229 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 PAQR6Q6TCH4 344 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 ANKRD46Q86W74 232 aa13.14□□□□□ -0.31
DDR1-278ENST00000515233 CNOT9Q92600 299 aaKnown RBP13.14□□□□□ -0.31
DDR1-278ENST00000515233 TMEM45BQ96B21 275 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms