RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 PLAURQ03405 335 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 NPRL3Q12980 569 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 TRAM2Q15035 370 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 EXOC3L2Q2M3D2 409 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 KLHL26Q53HC5 615 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 ACER2Q5QJU3 275 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 MRPL2Q5T653 305 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF691Q5VV52 312 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 KRT80Q6KB66 452 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 C1orf94Q6P1W5 598 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC29A4Q7RTT9 530 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF550Q7Z398 422 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 NUP54Q7Z3B4 507 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 CPEB2Q7Z5Q1 589 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 WDR53Q7Z5U6 358 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 THAP5Q7Z6K1 395 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 C9orf40Q8IXQ3 194 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 HS3ST5Q8IZT8 346 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 TAGAPQ8N103 731 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC43A2Q8N370 569 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 CLIP4Q8N3C7 705 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC15A4Q8N697 577 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 ATG16L2Q8NAA4 619 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 TMEM178AQ8NBL3 297 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF555Q8NEP9 628 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 ADAMTS16Q8TE57 1224 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 DOK4Q8TEW6 326 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 ACOT11Q8WXI4 607 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC38A4Q969I6 547 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 OTUB1Q96FW1 271 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 SCMH1Q96GD3 660 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 MPP4Q96JB8 637 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 FEVQ99581 238 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 LPAR4Q99677 370 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 UTP23Q9BRU9 249 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 FNDC11Q9BVV2 318 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 OR8D2Q9GZM6 311 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 QRSL1Q9H0R6 528 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 NXF5Q9H1B4 397 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF556Q9HAH1 456 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 SMURF2Q9HAU4 748 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 C12orf10Q9HB07 376 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 PAPOLBQ9NRJ5 636 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 KRT84Q9NSB2 600 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 TUBA8Q9NY65 449 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 OR10H1Q9Y4A9 318 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 CHD3Q12873 2000 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 TRBV4-1A0A0J9YWV2 114 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 TRAPPC13A5PLN9 417 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 SERINC4A6NH21 518 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 OR6C70A6NIJ9 312 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 A6NNC1 897 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 ALG1L2C9J202 215 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 H3BNH8 94 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 J3KTA2 159 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 MAN1A2O60476 641 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 MRPS14O60783 128 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 CYP7B1O75881 506 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 SEC24DO94855 1032 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 SP1P08047 785 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF24P17028 368 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 GSTM3P21266 225 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 PRKACGP22612 351 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 RFC3P40938 356 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 RBM34P42696 430 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 ISL1P61371 349 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 PIN1Q13526 163 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 APOFQ13790 326 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 GPR68Q15743 365 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 EXT1Q16394 746 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 BTBD16Q32M84 506 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 ENTPD8Q5MY95 495 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 CCNJQ5T5M9 372 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 TMEM81Q6P7N7 255 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 FIGNL1Q6PIW4 674 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 DEF8Q6ZN54 512 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 ZAR1Q86SH2 424 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 RBM45Q8IUH3 476 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 MISPQ8IVT2 679 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 C8orf59Q8N0T1 100 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC5A8Q8N695 610 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 CLDN22Q8N7P3 220 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 OR5L2Q8NGL0 311 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 HDAC2Q92769 488 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 COX4I2Q96KJ9 171 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 HS6ST2Q96MM7 605 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 MCHR1Q99705 422 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 WFDC6Q9BQY6 131 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 TRIM2Q9C040 744 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF700Q9H0M5 742 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 FBXO34Q9NWN3 711 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 CRIM1Q9NZV1 1036 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 KIF17Q9P2E2 1029 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 SCOCQ9UIL1 159 aa9.5□□□□□ -0.89
PDLIM5-217ENST00000512274 A0A0B4J2E0 115 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 CENPVL1A0A0U1RR11 272 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 A0A1B0GX12 115 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 A8MUA0 341 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 CDK2AP1O14519 115 aa9.49□□□□□ -0.89
PDLIM5-217ENST00000512274 BCKDKO14874 412 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms