RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 MAELQ96JY0 434 aaKnown RBP7.91□□□□□ -1.14
NUP54-211ENST00000512151 OR52B2Q96RD2 323 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 SERPINI1Q99574 410 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 ELAC2Q9BQ52 826 aaKnown RBP7.91□□□□□ -1.14
NUP54-211ENST00000512151 TMPRSS13Q9BYE2 586 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 RACGAP1Q9H0H5 632 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 RASSF4Q9H2L5 321 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 PLK3Q9H4B4 646 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 AKTIPQ9H8T0 292 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 MEAF6Q9HAF1 191 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 NPHS2Q9NP85 383 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.91□□□□□ -1.14
NUP54-211ENST00000512151 DDX28Q9NUL7 540 aaKnown RBP7.91□□□□□ -1.14
NUP54-211ENST00000512151 TREM2Q9NZC2 230 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 VPS29Q9UBQ0 182 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 MCM8Q9UJA3 840 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 CIB4A0PJX0 185 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 C1orf226A1L170 272 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 PEX11AO75192 247 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 RSL1D1O76021 490 aaKnown RBP7.9□□□□□ -1.14
NUP54-211ENST00000512151 SEMA3DO95025 777 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 TGDSO95455 350 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 BCL10O95999 233 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 CHEK2O96017 543 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 PNPP00491 289 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 PRB2P02812 416 aaPredicted RBP7.9□□□□□ -1.14
NUP54-211ENST00000512151 ITGA5P08648 1049 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 OR4A8P0C604 315 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 EPHA3P29320 983 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 NTF4P34130 210 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 AQP5P55064 265 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 IL13RA1P78552 427 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 PHEXP78562 749 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 PRR5P85299 388 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 C17orf67Q0P5P2 114 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 ZNF155Q12901 538 aaPredicted RBP7.9□□□□□ -1.14
NUP54-211ENST00000512151 FOXF1Q12946 379 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 TMEM176BQ3YBM2 270 aaPredicted RBP7.9□□□□□ -1.14
NUP54-211ENST00000512151 C6orf136Q5SQH8 315 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 CCNYL2Q5T2Q4 361 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 UGT2A3Q6UWM9 527 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 SPATA21Q7Z572 469 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 ZNF100Q8IYN0 542 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 BPIFB2Q8N4F0 458 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 C1orf52Q8N6N3 182 aaKnown RBP7.9□□□□□ -1.14
NUP54-211ENST00000512151 SIGLECL1Q8N7X8 197 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 GATSQ8NAP1 163 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 TOR1AIP2Q8NFQ8 470 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 UBASH3BQ8TF42 649 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 DVL3Q92997 716 aaPredicted RBP7.9□□□□□ -1.14
NUP54-211ENST00000512151 FCRL1Q96LA6 429 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 MUS81Q96NY9 551 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 TBL1XR1Q9BZK7 514 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 MMP27Q9H306 513 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 ARL2BPQ9Y2Y0 163 aa7.9□□□□□ -1.14
NUP54-211ENST00000512151 LOC100653049A0A140TA62 436 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 GXYLT2A0PJZ3 443 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 DNAJC9-AS1A6NH13 148 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 B9A039 149 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 SEC22BO75396 215 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 BCAS2O75934 225 aaPredicted RBP7.89□□□□□ -1.15
NUP54-211ENST00000512151 KRT34O76011 436 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 FSHBP01225 129 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 ALDOCP09972 364 aaKnown RBP7.89□□□□□ -1.15
NUP54-211ENST00000512151 LINGO3P0C6S8 592 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 GAAP10253 952 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 ME2P23368 584 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 PRTN3P24158 256 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 RFX3P48380 749 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 ALDH9A1P49189 494 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 KHKP50053 298 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 MAPK12P53778 367 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 LMO4P61968 165 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 PSPHP78330 225 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 RASGEF1BQ0VAM2 473 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 EFNB3Q15768 340 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 IMPG1Q17R60 797 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 LSM12Q3MHD2 195 aaKnown RBP7.89□□□□□ -1.15
NUP54-211ENST00000512151 GALNTL6Q49A17 601 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 CYP27C1Q4G0S4 372 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 SPDYAQ5MJ70 313 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 FBXW9Q5XUX1 488 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 LEG1Q6P5S2 330 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 TRPM8Q7Z2W7 1104 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 COMMD6Q7Z4G1 85 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 ANKK1Q8NFD2 765 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 OR51F2Q8NH61 342 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 WDR60Q8WVS4 1066 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 ZNF524Q96C55 264 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 TUBGCP3Q96CW5 907 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 SH3YL1Q96HL8 342 aaPredicted RBP7.89□□□□□ -1.15
NUP54-211ENST00000512151 EGLN2Q96KS0 407 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 MRGPRX4Q96LA9 322 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 EBPLQ9BY08 206 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 RAB1BQ9H0U4 201 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 TIGARQ9NQ88 270 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 SLC17A5Q9NRA2 495 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 C1orf109Q9NX04 203 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 SIRT5Q9NXA8 310 aa7.89□□□□□ -1.15
NUP54-211ENST00000512151 KLHL9Q9P2J3 617 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms