RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 CR1P17927 2039 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 VWC2LB2RUY7 222 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 DNPH1O43598 174 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 ZNF500O60304 480 aaPredicted RBP9.12□□□□□ -0.95
DDX41-211ENST00000510171 UGT2B17O75795 530 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 PMS2P2O95744 297 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 ITGA5P08648 1049 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 G6PDP11413 515 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 APEHP13798 732 aaKnown RBP9.12□□□□□ -0.95
DDX41-211ENST00000510171 CLK1P49759 484 aaKnown RBP9.12□□□□□ -0.95
DDX41-211ENST00000510171 SLC16A1P53985 500 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 FOXG1P55316 489 aaPredicted RBP9.12□□□□□ -0.95
DDX41-211ENST00000510171 OR2B6P58173 313 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 PRPS1P60891 318 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 ABCE1P61221 599 aaKnown RBP9.12□□□□□ -0.95
DDX41-211ENST00000510171 RPS26P62854 115 aaKnown RBP9.12□□□□□ -0.95
DDX41-211ENST00000510171 TGFBR3Q03167 851 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 CHI3L2Q15782 390 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 MST1LQ2TV78 715 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 C1QTNF12Q5T7M4 302 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 C9orf135Q5VTT2 229 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 CCDC103Q8IW40 242 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 LRRC34Q8IZ02 419 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 C17orf78Q8N4C9 275 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 C1orf162Q8NEQ5 155 aaPredicted RBP9.12□□□□□ -0.95
DDX41-211ENST00000510171 OR52E4Q8NGH9 312 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 OR5AK3PQ8NH89 298 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 FBXO17Q96EF6 278 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 DNAJA3Q96EY1 480 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 ARL5BQ96KC2 179 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 PKNOX2Q96KN3 472 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 FOXN4Q96NZ1 517 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 PIMREGQ9BSJ6 248 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 CCDC106Q9BWC9 280 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 PRR14Q9BWN1 585 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 PARD6BQ9BYG5 372 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 SLC17A5Q9NRA2 495 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 CTPS2Q9NRF8 586 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 PARPBPQ9NWS1 579 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 CHRNA9Q9UGM1 479 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.12□□□□□ -0.95
DDX41-211ENST00000510171 AMDHD2Q9Y303 409 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 RAP2CQ9Y3L5 183 aa9.12□□□□□ -0.95
DDX41-211ENST00000510171 V9GYY5 206 aaPredicted RBP9.12□□□□□ -0.95
DDX41-211ENST00000510171 LOC390937A0A1W2PQ73 354 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 WDR91A4D1P6 747 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 ATP6V1G2-DDX39BF2Z307 99 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 PDLIM1O00151 329 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 RNASET2O00584 256 aaKnown RBP9.11□□□□□ -0.95
DDX41-211ENST00000510171 KIAA0513O60268 411 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 TGFAP01135 160 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 PGRP06401 933 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 CCNA2P20248 432 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 RYKP34925 604 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 SOAT1P35610 550 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 PGM1P36871 562 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 RPL14P50914 215 aaKnown RBP9.11□□□□□ -0.95
DDX41-211ENST00000510171 HBA1P69905 142 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 PDCD2Q16342 344 aaPredicted RBP9.11□□□□□ -0.95
DDX41-211ENST00000510171 CARTPTQ16568 116 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 SWI5Q1ZZU3 235 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 PGS1Q32NB8 556 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 ARHGAP11BQ3KRB8 267 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 IQCCQ4KMZ1 466 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 CASP12Q6UXS9 341 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 C16orf62Q7Z3J2 963 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 GRINAQ7Z429 371 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 C6orf120Q7Z4R8 191 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 ADGRG3Q86Y34 549 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 ZNF781Q8N8C0 355 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 ZNF540Q8NDQ6 660 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 VPS37AQ8NEZ2 397 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 OR8J2Q8NGG1 315 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 C3orf49Q96BT1 292 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 OR11A1Q9GZK7 315 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 CENPHQ9H3R5 247 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 AKTIPQ9H8T0 292 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 SLC7A10Q9NS82 523 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 EXD2Q9NVH0 621 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 TMEM181Q9P2C4 612 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 DCTN4Q9UJW0 460 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 RAB21Q9UL25 225 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 PCDHGB4Q9UN71 923 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 MOKQ9UQ07 419 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 TRAPPC4Q9Y296 219 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 SLC35A3Q9Y2D2 325 aa9.11□□□□□ -0.95
DDX41-211ENST00000510171 ALPK2Q86TB3 2170 aa9.1□□□□□ -0.95
DDX41-211ENST00000510171 IGHV4-61A0A0C4DH41 118 aa9.1□□□□□ -0.95
DDX41-211ENST00000510171 CENPVL1A0A0U1RR11 272 aa9.1□□□□□ -0.95
DDX41-211ENST00000510171 ITM2AO43736 263 aa9.1□□□□□ -0.95
DDX41-211ENST00000510171 EIF1BO60739 113 aaKnown RBP9.1□□□□□ -0.95
DDX41-211ENST00000510171 AGR2O95994 175 aa9.1□□□□□ -0.95
DDX41-211ENST00000510171 WNT11O96014 354 aa9.1□□□□□ -0.95
DDX41-211ENST00000510171 MPGP29372 298 aa9.1□□□□□ -0.95
DDX41-211ENST00000510171 SERPINF1P36955 418 aa9.1□□□□□ -0.95
DDX41-211ENST00000510171 SLC1A6P48664 564 aa9.1□□□□□ -0.95
DDX41-211ENST00000510171 SNRPD2P62316 118 aaKnown RBP9.1□□□□□ -0.95
DDX41-211ENST00000510171 H3F3AP84243 136 aa9.1□□□□□ -0.95
DDX41-211ENST00000510171 MAPK14Q16539 360 aa9.1□□□□□ -0.95
DDX41-211ENST00000510171 DPY19L1Q2PZI1 675 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms