RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 GNA13Q14344 377 aa18.76■□□□□ 0.59
LIN54-208ENST00000509748 RPS26P11Q5JNZ5 115 aaPredicted RBP18.76■□□□□ 0.59
LIN54-208ENST00000509748 C6orf10Q5SRN2 563 aa18.76■□□□□ 0.59
LIN54-208ENST00000509748 BHLHA15Q7RTS1 189 aaPredicted RBP18.76■□□□□ 0.59
LIN54-208ENST00000509748 ATG4DQ86TL0 474 aaPredicted RBP18.76■□□□□ 0.59
LIN54-208ENST00000509748 MSRB3Q8IXL7 192 aa18.76■□□□□ 0.59
LIN54-208ENST00000509748 CLIP4Q8N3C7 705 aa18.76■□□□□ 0.59
LIN54-208ENST00000509748 LRRC8CQ8TDW0 803 aa18.76■□□□□ 0.59
LIN54-208ENST00000509748 TMEM19Q96HH6 336 aa18.76■□□□□ 0.59
LIN54-208ENST00000509748 RSPO3Q9BXY4 272 aaPredicted RBP18.76■□□□□ 0.59
LIN54-208ENST00000509748 CALML5Q9NZT1 146 aa18.76■□□□□ 0.59
LIN54-208ENST00000509748 NAV3Q8IVL0 2385 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 LYZL6O75951 148 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 CNOT4O95628 575 aaKnown RBP18.75■□□□□ 0.59
LIN54-208ENST00000509748 BMP2P12643 396 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 CRISP3P54108 245 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 OR2B6P58173 313 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 RGNQ15493 299 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 NCMAPQ5T1S8 102 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 ALKBH2Q6NS38 261 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 BLOC1S3Q6QNY0 202 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 ZNF440Q8IYI8 595 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 USB1Q9BQ65 265 aaKnown RBP18.75■□□□□ 0.59
LIN54-208ENST00000509748 CCDC28BQ9BUN5 200 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 SLC25A37Q9NYZ2 338 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 EMC3Q9P0I2 261 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 SLAMF8Q9P0V8 285 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 PRDM4Q9UKN5 801 aa18.75■□□□□ 0.59
LIN54-208ENST00000509748 ZNF443Q9Y2A4 671 aaPredicted RBP18.75■□□□□ 0.59
LIN54-208ENST00000509748 A0A096LPI6 279 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 A0A0G2JPF8 293 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 HNRNPCL2B2RXH8 293 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 HNRNPCL3B7ZW38 293 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 CLIC1O00299 241 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 HS3ST1O14792 307 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 POLR3GO15318 223 aaPredicted RBP18.74■□□□□ 0.59
LIN54-208ENST00000509748 HNRNPCL1O60812 293 aaKnown RBP18.74■□□□□ 0.59
LIN54-208ENST00000509748 PGM3O95394 542 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 THBS1P07996 1170 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 HNRNPCL4P0DMR1 293 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 PRG2P13727 222 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 MAP2K6P52564 334 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 LIN52Q52LA3 116 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 Q5PR19 223 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 LRIF1Q5T3J3 769 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 RNF220Q5VTB9 566 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 ADAM5Q6NVV9 412 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 ZNF100Q8IYN0 542 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 ZNF433Q8N7K0 673 aaPredicted RBP18.74■□□□□ 0.59
LIN54-208ENST00000509748 ZNF611Q8N823 705 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 PIGXQ8TBF5 258 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 ZHX1-C8orf76Q96EF9 292 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 POTEKPQ9BYX7 375 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 BCL2L10Q9HD36 194 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 THUMPD1Q9NXG2 353 aaKnown RBP18.74■□□□□ 0.59
LIN54-208ENST00000509748 ZANQ9Y493 2812 aa18.74■□□□□ 0.59
LIN54-208ENST00000509748 DPRXA6NFQ7 191 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 ARHGEF9O43307 516 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 PAX1P15863 534 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 AQP5P55064 265 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 SLC35A1P78382 337 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 FBXW9Q5XUX1 488 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 PRSS57Q6UWY2 283 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 P3H2Q8IVL5 708 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 C10orf111Q8N326 155 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 AKAP1Q92667 903 aaKnown RBP eCLIP18.73■□□□□ 0.59
LIN54-208ENST00000509748 MAL2Q969L2 176 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 DDIT4LQ96D03 193 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 SPATA9Q9BWV2 254 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 GSX2Q9BZM3 304 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 A4GALTQ9NPC4 353 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 NOSIPQ9Y314 301 aaKnown RBP18.73■□□□□ 0.59
LIN54-208ENST00000509748 PLCE1Q9P212 2302 aa18.73■□□□□ 0.59
LIN54-208ENST00000509748 NSD1Q96L73 2696 aaPredicted RBP18.73■□□□□ 0.59
LIN54-208ENST00000509748 TRBV5-3A0A0A0MS03 114 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 GPR171O14626 319 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 IGHV3-9P01782 118 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 UQCRBP14927 111 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 STX1BP61266 288 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 PAGE3Q5JUK9 113 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 PRAMEF8Q5VWM4 474 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 PRAMEF7Q5VXH5 474 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 NEUROG1Q92886 237 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 PERPQ96FX8 193 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 C18orf12Q96KH6 178 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 SMR3AQ99954 134 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 ZNF701Q9NV72 531 aaPredicted RBP18.72■□□□□ 0.59
LIN54-208ENST00000509748 RNF115Q9Y4L5 304 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 GMEB1Q9Y692 573 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 TLN2Q9Y4G6 2542 aa18.72■□□□□ 0.59
LIN54-208ENST00000509748 LIPT2A6NK58 231 aa18.71■□□□□ 0.59
LIN54-208ENST00000509748 EIF1BO60739 113 aaKnown RBP18.71■□□□□ 0.59
LIN54-208ENST00000509748 ADSLP30566 484 aaPredicted RBP18.71■□□□□ 0.59
LIN54-208ENST00000509748 PTH2RP49190 550 aa18.71■□□□□ 0.59
LIN54-208ENST00000509748 FOXG1P55316 489 aaPredicted RBP18.71■□□□□ 0.59
LIN54-208ENST00000509748 FADDQ13158 208 aa18.71■□□□□ 0.59
LIN54-208ENST00000509748 CAPRIN1Q14444 709 aaKnown RBP18.71■□□□□ 0.59
LIN54-208ENST00000509748 SLC17A1Q14916 467 aa18.71■□□□□ 0.59
LIN54-208ENST00000509748 LARS2Q15031 903 aaKnown RBP18.71■□□□□ 0.59
LIN54-208ENST00000509748 ZSWIM7Q19AV6 140 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms