RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 PPA1Q15181 289 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 RAB35Q15286 201 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF239Q16600 458 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 DECR1Q16698 335 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 FAM83EQ2M2I3 478 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 ARL13AQ5H913 290 aaPredicted RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 FAM120AOSQ5T036 256 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 CPTPQ5TA50 214 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 OR5M10Q6IEU7 315 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 MFSD12Q6NUT3 480 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 BHLHB9Q6PI77 547 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 Q6ZSR9 355 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 COMMD6Q7Z4G1 85 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 GOLGA7Q7Z5G4 137 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 GALNT10Q86SR1 603 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 SPATA6LQ8N4H0 392 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF540Q8NDQ6 660 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 KBTBD8Q8NFY9 601 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 OR2V1Q8NHB1 315 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 DUSP19Q8WTR2 217 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 KLHL29Q96CT2 875 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 MS4A14Q96JA4 679 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 LMF2Q9BU23 707 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 CACNG6Q9BXT2 260 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 MS4A7Q9GZW8 240 aaPredicted RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 VPS11Q9H270 941 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 SERHL2Q9H4I8 314 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 CAB39LQ9H9S4 337 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 Q9N2J8 555 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 LZTFL1Q9NQ48 299 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 TRIM36Q9NQ86 728 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 TIGARQ9NQ88 270 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 TAS2R7Q9NYW3 318 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 MED11Q9P086 117 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 KLHL13Q9P2N7 655 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 UTS2RQ9UKP6 389 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 C19orf53Q9UNZ5 99 aaPredicted RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 RNF11Q9Y3C5 154 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 CADP27708 2225 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 ARFGEF3Q5TH69 2177 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 A0A0J9YW62 118 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 LOC390937A0A1W2PQ73 354 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 TCRBV9S1A1TA0A576 114 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CCDC151A5D8V7 595 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 OR5H1A6NKK0 313 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 GJE1A6NN92 205 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF724A8MTY0 619 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 MYO1GB0I1T2 1018 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF814B7Z6K7 855 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 E7EQL1 145 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CCDC188H7C350 402 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 SMAD9O15198 467 aaKnown RBP3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 MPPED1O15442 326 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CLOCKO15516 846 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CXCL13O43927 109 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 KLHL2O95198 593 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 ANGPTL1O95841 491 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 ADAP00813 363 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 GBAP04062 536 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 DHRS4L1P0CG22 281 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CTAGE8P0CG41 777 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 HKR1P10072 659 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 GFAPP14136 432 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 PCMT1P22061 227 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 OR3A2P47893 321 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 PDLIM4P50479 330 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CCNG1P51959 295 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CDH11P55287 796 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CARD18P57730 90 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 KRTAP10-2P60368 255 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 MRPS35P82673 323 aaKnown RBP3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CHRNB3Q05901 458 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CSTF3Q12996 717 aaKnown RBP3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 TRAF3Q13114 568 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 SCGB2A2Q13296 93 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 SLC29A2Q14542 456 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 FASTKD3Q14CZ7 662 aaKnown RBP3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 PDK3Q15120 406 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNHIT3Q15649 155 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 LTB4RQ15722 352 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 PFKFB4Q16877 469 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 KCTD19Q17RG1 926 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 PLPPR5Q32ZL2 321 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 PLA1AQ53H76 456 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 HBMQ6B0K9 141 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 TMEM108Q6UXF1 575 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 C12orf54Q6X4T0 127 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 RAPH1Q70E73 1250 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 BHLHA15Q7RTS1 189 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 MTERF4Q7Z6M4 381 aaKnown RBP3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CCDC25Q86WR0 208 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 MYLK4Q86YV6 388 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 SLC44A2Q8IWA5 706 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CTAGE4Q8IX94 777 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZBED8Q8IZ13 594 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 FAM9CQ8IZT9 166 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 CENPLQ8N0S6 344 aaPredicted RBP3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 FBXL14Q8N1E6 418 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 OR2L13Q8N349 312 aa3.81□□□□□ -1.8
CALCOCO2-213ENST00000509112 MUC15Q8N387 334 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms