RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 PCGF2P35227 344 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 KCNJ5P48544 419 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 GZMMP51124 257 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 SUMO3P55854 103 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 FBXW4P57775 412 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 MTPNP58546 118 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 CDK6Q00534 326 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 RAPSNQ13702 412 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 SCARB2Q14108 478 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 GANABQ14697 944 aaKnown RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 LARS2Q15031 903 aaKnown RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 NNATQ16517 81 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 CYP51A1Q16850 503 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 LIN52Q52LA3 116 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 GPAT3Q53EU6 434 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 KLHL26Q53HC5 615 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 SAMD4BQ5PRF9 694 aaKnown RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 SPINK14Q6IE38 97 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 TYW3Q6IPR3 259 aaKnown RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 FRRS1Q6ZNA5 592 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 C16orf47Q6ZP98 133 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 CCDC80Q76M96 950 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 YTHDF3Q7Z739 585 aaKnown RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 ZNF440Q8IYI8 595 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 PRR22Q8IZ63 422 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 CLEC4FQ8N1N0 589 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 ZNF619Q8N2I2 560 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 RBMXL3Q8N7X1 1067 aaKnown RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 ZFP62Q8NB50 900 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 TOR1AIP2Q8NFQ8 470 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR2T12Q8NG77 320 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR10G3Q8NGC4 313 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR4N2Q8NGD1 307 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR10A6Q8NH74 314 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 PNPT1Q8TCS8 783 aaKnown RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC38A5Q8WUX1 472 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 PIK3R3Q92569 461 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 RAB8BQ92930 207 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 EFHD2Q96C19 240 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 AURKBQ96GD4 344 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 TMEM19Q96HH6 336 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 TMEM41AQ96HV5 264 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 RNF145Q96MT1 663 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 ZNF583Q96ND8 569 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 TREX2Q9BQ50 279 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 BTBD10Q9BSF8 475 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 MLST8Q9BVC4 326 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 OSBPL11Q9BXB4 747 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 TBL1XR1Q9BZK7 514 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC38A1Q9H2H9 487 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 MUC13Q9H3R2 512 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 IKZF5Q9H5V7 419 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 KLRF1Q9NZS2 232 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 B4GALT7Q9UBV7 327 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 BOKQ9UMX3 212 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC45A2Q9UMX9 530 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC35A3Q9Y2D2 325 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 MRPS18CQ9Y3D5 142 aaKnown RBP4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 DTNAQ9Y4J8 743 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 WIF1Q9Y5W5 379 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 KCNE3Q9Y6H6 103 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 POLEQ07864 2286 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 NBASA2RRP1 2371 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 ZNF407Q9C0G0 2248 aa4.99□□□□□ -1.61
HMGB1P44-201ENST00000508597 CHD6Q8TD26 2715 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 PCNX3Q9H6A9 2034 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 ELOVL7A1L3X0 281 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 MBD3L4A6NDZ8 208 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 MBD3L3A6NE82 208 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 SERINC4A6NH21 518 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 AGAP5A6NIR3 686 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 DIRC3C9JPN6 131 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 GYG2O15488 501 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 PEX1O43933 1283 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 FCMRO60667 390 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 ICOSLGO75144 302 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 TRIM3O75382 744 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 UGT2B17O75795 530 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 CBR3O75828 277 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 NCR1O76036 304 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 RASAL1O95294 804 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 STAMBPO95630 424 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 OXSR1O95747 527 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 IGKV1D-16P01601 117 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 BCHEP06276 602 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 CHRM4P08173 479 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 ELANEP08246 267 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 PABPC4LP0CB38 370 aaKnown RBP4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 CCL3P10147 92 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 IL7RP16871 459 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 HOXB6P17509 224 aaKnown RBP4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 RPS4Y1P22090 263 aaKnown RBP4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 TNFSF4P23510 183 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 PRKAR1BP31321 381 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 CPOXP36551 454 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 DCTP40126 519 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC6A8P48029 635 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 CPA2P48052 419 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 RFX3P48380 749 aa4.98□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC7A2P52569 658 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms