RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 MT-ND1P03886 318 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 TSPAN19P0C672 248 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 EDN3P14138 238 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 CXCR1P25024 350 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 RRM2P31350 389 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 DNAJA1P31689 397 aaKnown RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 RNF144AP50876 292 aaPredicted RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 CLDN18P56856 261 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 PMP22Q01453 160 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 PRKCDQ05655 676 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 LY6DQ14210 128 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 MFSD13AQ14CX5 517 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 ELOA3BQ3SY89 546 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 SYT14P1Q58G82 188 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 RAET1LQ5VY80 246 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 ZNF770Q6IQ21 691 aaPredicted RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 SHQ1Q6PI26 577 aaKnown RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 CD300LDQ6UXZ3 194 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 WDR88Q6ZMY6 472 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 TMPRSS11FQ6ZWK6 438 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 MBOAT2Q6ZWT7 520 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 ADGRE4PQ86SQ3 457 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 GGNQ86UU5 652 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 CHERPQ8IWX8 916 aaKnown RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 PM20D2Q8IYS1 436 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 GHDCQ8N2G8 530 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 PQLC1Q8N2U9 271 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 CADM2Q8N3J6 435 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 SVOPLQ8N434 492 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 ELOA3Q8NG57 546 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 MFSD8Q8NHS3 518 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 TMEM239Q8WW34 195 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 PYDC1Q8WXC3 89 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 DNAJC9Q8WXX5 260 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 MIB2Q96AX9 1013 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 SARAFQ96BY9 339 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 SNRNP40Q96DI7 357 aaKnown RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 REEP1Q9H902 201 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 C8orf4Q9NR00 106 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 TMEM5Q9Y2B1 443 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 TMED7Q9Y3B3 224 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 RRP15Q9Y3B9 282 aaKnown RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 ZNF337Q9Y3M9 751 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 V9GYQ6 96 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 SPENQ96T58 3664 aaKnown RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 PRRC2CQ9Y520 2896 aaKnown RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 TRAV36DV7A0A075B6V5 113 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 FAM166BA8MTA8 275 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 FTCDNL1E5RQL4 147 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 BCKDKO14874 412 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 CASQ2O14958 399 aaPredicted RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 KLF4O43474 513 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 TIPRLO75663 272 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 TRAPPC6AO75865 159 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 HOXD4P09016 255 aaPredicted RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 CELA3AP09093 270 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 BMP7P18075 431 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 FPR1P21462 350 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 PTGER4P35408 488 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 IFNGR2P38484 337 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 SLC9A3P48764 834 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 ARHGDIAP52565 204 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 H3F3AP84243 136 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 SF3B4Q15427 424 aaKnown RBP eCLIP7.78□□□□□ -1.16
USP46-207ENST00000508499 MICAQ29983 383 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 CTU2Q2VPK5 515 aaKnown RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 WIPI1Q5MNZ9 446 aaPredicted RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 DCST1Q5T197 706 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 FAM69AQ5T7M9 428 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 C1orf94Q6P1W5 598 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 TTC33Q6PID6 262 aaPredicted RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 Q6ZPB1 254 aaPredicted RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 YRDCQ86U90 279 aaKnown RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 LILRA2Q8N149 483 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 SLC43A2Q8N370 569 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 ADPRHL1Q8NDY3 354 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 ZPLD1Q8TCW7 415 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 ABTB1Q969K4 478 aaPredicted RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 KLHL15Q96M94 604 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 SFXN2Q96NB2 322 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 ALPK1Q96QP1 1244 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 TIMP4Q99727 224 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 NPAS1Q99742 590 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 PTDSS2Q9BVG9 487 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 GABARAPL1Q9H0R8 117 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 RASSF4Q9H2L5 321 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 KRCC1Q9NPI7 259 aaPredicted RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 MEPEQ9NQ76 525 aaPredicted RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 ZNF835Q9Y2P0 537 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 MED31Q9Y3C7 131 aa7.78□□□□□ -1.16
USP46-207ENST00000508499 SAMHD1Q9Y3Z3 626 aaKnown RBP7.78□□□□□ -1.16
USP46-207ENST00000508499 CACNA1BQ00975 2339 aa7.77□□□□□ -1.17
USP46-207ENST00000508499 TRBV4-1A0A0J9YWV2 114 aa7.77□□□□□ -1.17
USP46-207ENST00000508499 LOC102725191A0A1B0GVB3 256 aa7.77□□□□□ -1.17
USP46-207ENST00000508499 TMEM72A0PK05 275 aa7.77□□□□□ -1.17
USP46-207ENST00000508499 AHRRA9YTQ3 701 aa7.77□□□□□ -1.17
USP46-207ENST00000508499 H0YHG0 523 aa7.77□□□□□ -1.17
USP46-207ENST00000508499 TNFRSF11BO00300 401 aa7.77□□□□□ -1.17
USP46-207ENST00000508499 EIF1BO60739 113 aaKnown RBP7.77□□□□□ -1.17
USP46-207ENST00000508499 WISP1O95388 367 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms