RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 B3GALT5Q9Y2C3 310 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 TMED7Q9Y3B3 224 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 SLC25A15Q9Y619 301 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 V9GYY5 206 aaPredicted RBP10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 PLCE1Q9P212 2302 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 ABCA1O95477 2261 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 DNHD1Q96M86 4753 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 TMEM72A0PK05 275 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 CCDC154A6NI56 674 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 AGAP5A6NIR3 686 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 E7EQL1 145 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 M0R1B8 84 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 SSX4O60224 188 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 CHRM4P08173 479 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 ITGA5P08648 1049 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 ALDOCP09972 364 aaKnown RBP10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 IMPDH2P12268 514 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 PTAFRP25105 342 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 CD40P25942 277 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 FKBP2P26885 142 aaKnown RBP10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 CDKN2CP42773 168 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 MAGEA8P43361 318 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 CLK1P49759 484 aaKnown RBP10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 POLR2HP52434 150 aaKnown RBP10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 UFM1P61960 85 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 STX3Q13277 289 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 NRF1Q16656 503 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 C9orf135Q5VTT2 229 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 C11orf71Q6IPW1 123 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 OGFOD2Q6N063 350 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 SLC22A25Q6T423 547 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 KLHL17Q6TDP4 642 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 CXXC5Q7LFL8 322 aaKnown RBP10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 CMIPQ8IY22 773 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 LRRC34Q8IZ02 419 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 KIRREL3Q8IZU9 778 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 OR52E4Q8NGH9 312 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 WDR60Q8WVS4 1066 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 ZBTB9Q96C00 473 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 RADILQ96JH8 1075 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 ADAD1Q96M93 576 aaKnown RBP10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 TRNT1Q96Q11 434 aaKnown RBP10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 PANX1Q96RD7 426 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 INPP5KQ9BT40 448 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 SLC38A1Q9H2H9 487 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 MEAF6Q9HAF1 191 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 YAE1D1Q9NRH1 226 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 AIG1Q9NVV5 245 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 OSGIN1Q9UJX0 560 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 MGAT4BQ9UQ53 548 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 RTTNQ86VV8 2226 aa10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 YLPM1P49750 1951 aaKnown RBP10.15□□□□□ -0.78
HMGCS1-204ENST00000507293 SONP18583 2426 aaKnown RBP10.15□□□□□ -0.79
HMGCS1-204ENST00000507293 ZC3H12DA2A288 527 aaKnown RBP10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 SDHDO14521 159 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 ZNF208O43345 1280 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 TLX2O43763 284 aaPredicted RBP10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 CD5LO43866 347 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 ZNF500O60304 480 aaPredicted RBP10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 GSNP06396 782 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 RPS4Y1P22090 263 aaKnown RBP10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 TACR3P29371 465 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 IL12AP29459 219 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 TTKP33981 857 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 HTR3AP46098 478 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 ANXA11P50995 505 aaKnown RBP10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 NUDT6P53370 316 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 SLC35A1P78382 337 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 IRX1P78414 480 aaPredicted RBP10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 H3F3AP84243 136 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 BST1Q10588 318 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 MPP2Q14168 576 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 GABRA6Q16445 453 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 COX20Q5RI15 118 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 MRPL2Q5T653 305 aaKnown RBP10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 LRRC74BQ6ZQY2 392 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 FBXL14Q8N1E6 418 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 TRIML2Q8N7C3 387 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 WDR31Q8NA23 367 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 PNPT1Q8TCS8 783 aaKnown RBP10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 DDIT4LQ96D03 193 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 MUS81Q96NY9 551 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 OR52E6Q96RD3 313 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 DHRS9Q9BPW9 319 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 RHNO1Q9BSD3 238 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 NAA11Q9BSU3 229 aaPredicted RBP10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 C1QTNF6Q9BXI9 259 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 CENPHQ9H3R5 247 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 KCNK9Q9NPC2 374 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 SLC7A10Q9NS82 523 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 CBLN4Q9NTU7 201 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 TRAPPC4Q9Y296 219 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 SLC9A8Q9Y2E8 581 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 FLVCR1Q9Y5Y0 555 aa10.14□□□□□ -0.79
HMGCS1-204ENST00000507293 IGHV4-30-2A0A087WSY4 118 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 PDLIM1O00151 329 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 FAAHO00519 579 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 EIF1BO60739 113 aaKnown RBP10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 PGRP06401 933 aa10.13□□□□□ -0.79
HMGCS1-204ENST00000507293 DBIP07108 87 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms