RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 OR6C70A6NIJ9 312 aa15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 APOL3O95236 402 aa15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 PTNP21246 168 aa15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 DCDP81605 110 aaKnown RBP15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 TRA2AQ13595 282 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 ZNF574Q6ZN55 896 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 SHFQ7M4L6 423 aa15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 OR8K3Q8NH51 312 aa15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 ZNF563Q8TA94 476 aa15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 NUBPLQ8TB37 319 aa15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 OMA1Q96E52 524 aa15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 TBL1XR1Q9BZK7 514 aa15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 TRAPPC4Q9Y296 219 aa15.8■□□□□ 0.12
TRAPPC11-204ENST00000505676 NDUFB5O43674 189 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 F8A1P23610 371 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 RPL4P36578 427 aaKnown RBP15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 NR0B1P51843 470 aaKnown RBP15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 ACTA2P62736 377 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 RPS25P62851 125 aaKnown RBP15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 ACTG2P63267 376 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 CCL7P80098 99 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 HSF2Q03933 536 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 ZNF74Q16587 644 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 NDUFAF6Q330K2 333 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 PERM1Q5SV97 790 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 FAM98AQ8NCA5 519 aaKnown RBP15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 OR5M3Q8NGP4 307 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 METTL21AQ8WXB1 218 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 PIGKQ92643 395 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 SLC30A2Q9BRI3 323 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 ZNF229Q9UJW7 825 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 UNC80Q8N2C7 3258 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 IGKV1D-42A0A075B6H8 117 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 IGHV5-10-1A0A0J9YXX1 117 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 ICOSLGO75144 302 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 OR2T7P0C7T2 308 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 NAGAP17050 411 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 CCR4P51679 360 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 CBFBQ13951 182 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 PRAMEF17Q5VTA0 474 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 OR2T27Q8NH04 317 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 OR5W2Q8NH69 310 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 OR6C1Q96RD1 312 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 LMF1Q96S06 567 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 OR51V1Q9H2C8 321 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 SP140LQ9H930 580 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 FKRPQ9H9S5 495 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 ADGRL4Q9HBW9 690 aa15.79■□□□□ 0.12
TRAPPC11-204ENST00000505676 A0A1W2PQM1 296 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 ANKRD33BA6NCL7 494 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 WWP2O00308 870 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 SCRG1O75711 98 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 CDRT1O95170 752 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 HEXBP07686 556 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 TBC1D25Q3MII6 688 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 C22orf42Q6IC83 251 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 PLEKHG7Q6ZR37 379 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 OVCH1Q7RTY7 1134 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 SYS1Q8N2H4 156 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 PARP16Q8N5Y8 322 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 ARIH2OSQ8N7S6 290 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 OR52E2Q8NGJ4 325 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 HAVCR2Q8TDQ0 301 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 SLC26A1Q9H2B4 701 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 GAREM1Q9H706 876 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 NANSQ9NR45 359 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 CTSFQ9UBX1 484 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 C19orf25Q9UFG5 118 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 IER3IP1Q9Y5U9 82 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 TXNDC12O95881 172 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 MT-ATP6P00846 226 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 MYF5P13349 255 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 ABCD3P28288 659 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 HTR3AP46098 478 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 SLC25A1P53007 311 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 SLC26A5P58743 744 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 DEFA1P59665 94 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 DEFA3P59666 94 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 ATP1A4Q13733 1029 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 IL11RAQ14626 422 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 PON3Q15166 354 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 ZNF791Q3KP31 576 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 BTLAQ7Z6A9 289 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 ANKRD37Q7Z713 158 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 PPP1R3BQ86XI6 285 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 OR10H4Q8NGA5 316 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 SMPDL3BQ92485 455 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 ARSGQ96EG1 525 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 TRMT61AQ96FX7 289 aaKnown RBP15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 CNN2Q99439 309 aaKnown RBP15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 MMP25Q9NPA2 562 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 SLC22A11Q9NSA0 550 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 SNTG1Q9NSN8 517 aa15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 RYDENQ9NUL5 291 aaKnown RBP15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 ATXN7L1Q9ULK2 861 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC11-204ENST00000505676 VSTM2BA6NLU5 285 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 ALOX12BO75342 701 aa15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 RGS9O75916 674 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC11-204ENST00000505676 CD1AP06126 327 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms