RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 DNPH1O43598 174 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 LYZL6O75951 148 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 CHRM4P08173 479 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 TFPTP0C1Z6 253 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 ZCCHC18P0CG32 403 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 GGT1P19440 569 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 CXCR1P25024 350 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 TACR3P29371 465 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 CRISP3P54108 245 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 COPZ1P61923 177 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 LARS2Q15031 903 aaKnown RBP10.58□□□□□ -0.72
MED28-203ENST00000503945 PPA1Q15181 289 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 STK11Q15831 433 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 ZSWIM7Q19AV6 140 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 TIMM23BQ5SRD1 257 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 ADAM5Q6NVV9 412 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 CCDC103Q8IW40 242 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 OR52P1PQ8NH57 321 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 PIGXQ8TBF5 258 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 APH1AQ96BI3 265 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 OR11A1Q9GZK7 315 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 P2RX2Q9UBL9 471 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 OSGIN1Q9UJX0 560 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 CSPG4Q6UVK1 2322 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 RAI1Q7Z5J4 1906 aaPredicted RBP10.58□□□□□ -0.72
MED28-203ENST00000503945 ZANQ9Y493 2812 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 TLN2Q9Y4G6 2542 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 A0A0G2JPF8 293 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 TRIM64A6NGJ6 449 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 TRIM64BA6NI03 449 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 CCT8L1PA6NM43 557 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 HNRNPCL2B2RXH8 293 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 HNRNPCL3B7ZW38 293 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 FAAHO00519 579 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 AP3D1O14617 1153 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 HNRNPCL1O60812 293 aaKnown RBP10.57□□□□□ -0.72
MED28-203ENST00000503945 ADAM11O75078 769 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 TGDSO95455 350 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 HNRNPCL4P0DMR1 293 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 PAX1P15863 534 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 PTH2RP49190 550 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 ATP5J2P56134 94 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 H3F3AP84243 136 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 C6orf10Q5SRN2 563 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 MRPL2Q5T653 305 aaKnown RBP10.57□□□□□ -0.72
MED28-203ENST00000503945 EPGNQ6UW88 154 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 MSANTD1Q6ZTZ1 278 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 SMAP2Q8WU79 429 aaPredicted RBP10.57□□□□□ -0.72
MED28-203ENST00000503945 SLC38A5Q8WUX1 472 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 FBXW5Q969U6 566 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 DNAJA3Q96EY1 480 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 TRMT61AQ96FX7 289 aaKnown RBP10.57□□□□□ -0.72
MED28-203ENST00000503945 RADILQ96JH8 1075 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 OR52B2Q96RD2 323 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 POTEKPQ9BYX7 375 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 ADAM19Q9H013 955 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 RLIMQ9NVW2 624 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 ASB6Q9NWX5 421 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 USH1CQ9Y6N9 552 aa10.57□□□□□ -0.72
MED28-203ENST00000503945 ROS1P08922 2347 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 FBN3Q75N90 2809 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 TMEM72A0PK05 275 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 FAM234BA2RU67 622 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 CDHR4A6H8M9 788 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 DPRXA6NFQ7 191 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 ZNF716A6NP11 495 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 PGM3O95394 542 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 IGHV3-9P01782 118 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 GKN3PP0CG01 181 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 ETFAP13804 333 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 NCF2P19878 526 aaPredicted RBP10.56□□□□□ -0.72
MED28-203ENST00000503945 RPS4Y1P22090 263 aaKnown RBP10.56□□□□□ -0.72
MED28-203ENST00000503945 IGHV1-2P23083 117 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 SLC16A1P53985 500 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 DSTNP60981 165 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 STX1BP61266 288 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 RPS4XP62701 263 aaKnown RBP10.56□□□□□ -0.72
MED28-203ENST00000503945 BSPH1Q075Z2 132 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 EPS8Q12929 822 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 AGBL2Q5U5Z8 902 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 TMEM225Q6GV28 225 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 WBP2NLQ6ICG8 309 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 OR7E24Q6IFN5 339 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 DNAJC14Q6Y2X3 702 aaPredicted RBP10.56□□□□□ -0.72
MED28-203ENST00000503945 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.56□□□□□ -0.72
MED28-203ENST00000503945 VRK2Q86Y07 508 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 CADM2Q8N3J6 435 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 ZNF433Q8N7K0 673 aaPredicted RBP10.56□□□□□ -0.72
MED28-203ENST00000503945 LILRB1Q8NHL6 650 aaPredicted RBP10.56□□□□□ -0.72
MED28-203ENST00000503945 LRRC8CQ8TDW0 803 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 GTPBP3Q969Y2 492 aaKnown RBP10.56□□□□□ -0.72
MED28-203ENST00000503945 VPS33AQ96AX1 596 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 RAD21L1Q9H4I0 556 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 SLC6A13Q9NSD5 602 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 ZNF701Q9NV72 531 aaPredicted RBP10.56□□□□□ -0.72
MED28-203ENST00000503945 CISD1Q9NZ45 108 aaKnown RBP10.56□□□□□ -0.72
MED28-203ENST00000503945 UPB1Q9UBR1 384 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 IFT52Q9Y366 437 aa10.56□□□□□ -0.72
MED28-203ENST00000503945 PCDHB14Q9Y5E9 798 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms