RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 RYKP34925 604 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 MAGEA8P43361 318 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 CLK1P49759 484 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 EFNA4P52798 201 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 PHC1P78364 1004 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 MAD2L1Q13257 205 aaPredicted RBP12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 SAXO2Q658L1 398 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 CYB5R2Q6BCY4 276 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 TNFAIP8L2Q6P589 184 aaPredicted RBP12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 CASP12Q6UXS9 341 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 HMGN2P46Q86SG4 172 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 DEPDC4Q8N2C3 294 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 RIBC1Q8N443 379 aaPredicted RBP12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 C17orf78Q8N4C9 275 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 OR4A15Q8NGL6 344 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 RAB8BQ92930 207 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 ROPN1LQ96C74 230 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 C1QTNF6Q9BXI9 259 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 SLC17A5Q9NRA2 495 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 NOP53Q9NZM5 478 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 TMEM181Q9P2C4 612 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 LPAR3Q9UBY5 353 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 LGALS13Q9UHV8 139 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 DCTN4Q9UJW0 460 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 TRAPPC4Q9Y296 219 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 SLC9A8Q9Y2E8 581 aa12.38□□□□□ -0.43
POLR2J3-207ENST00000503564 TLDC2A0PJX2 215 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 TMEM72A0PK05 275 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 VWC2LB2RUY7 222 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 ATP6V1G2-DDX39BF2Z307 99 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 AP3D1O14617 1153 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 AGR2O95994 175 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 IMPDH2P12268 514 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 USF1P22415 310 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 IGFBP5P24593 272 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 FKBP2P26885 142 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 OR2B6P58173 313 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 KCNJ10P78508 379 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 SMU1Q2TAY7 513 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 ATAD3BQ5T9A4 648 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 TSPO2Q5TGU0 170 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 C9orf135Q5VTT2 229 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 ANKRD46Q86W74 232 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 XAGE5Q8WWM1 108 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 NEURL3Q96EH8 262 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 ZIM3Q96PE6 472 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 BEX2Q9BXY8 128 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 SLC7A10Q9NS82 523 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 PCDHGB4Q9UN71 923 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 AMDHD2Q9Y303 409 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 ATP23Q9Y6H3 246 aa12.37□□□□□ -0.43
POLR2J3-207ENST00000503564 TMED7-TICAM2A0A0A6YYA0 188 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 ZNF208O43345 1280 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 C1QCP02747 245 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 BPGMP07738 259 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 NUDT17P0C025 328 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 CREB1P16220 341 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 CCNA2P20248 432 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 UQCRC2P22695 453 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 APOBEC3AP31941 199 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 THBS2P35442 1172 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 ETV4P43268 484 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 IDH2P48735 452 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 KHKP50053 298 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 SLC35A1P78382 337 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 SLC17A1Q14916 467 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 SWI5Q1ZZU3 235 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 MST1LQ2TV78 715 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 C1QTNF12Q5T7M4 302 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 ARFGAP2Q8N6H7 521 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 ARIH2OSQ8N7S6 290 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 CNOT9Q92600 299 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 TMEM45BQ96B21 275 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 SHARPINQ9H0F6 387 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 FKRPQ9H9S5 495 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 OSGIN1Q9UJX0 560 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 TMED7Q9Y3B3 224 aa12.36□□□□□ -0.43
POLR2J3-207ENST00000503564 PRSS51A0A1B0GVH4 220 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 ZC3H12DA2A288 527 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 HMGN4O00479 90 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 LMX1BO60663 402 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 EIF1BO60739 113 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 MPGP29372 298 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 HTR3AP46098 478 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 POLR2HP52434 150 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 CHRNB3Q05901 458 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 CASP8Q14790 479 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 PDCD2Q16342 344 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 PAQR6Q6TCH4 344 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 ZIC4Q8N9L1 334 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 TESCQ96BS2 214 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 BOD1Q96IK1 185 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 SORCS2Q96PQ0 1159 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 DPY30Q9C005 99 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 AKTIPQ9H8T0 292 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 PARPBPQ9NWS1 579 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 UPB1Q9UBR1 384 aa12.35□□□□□ -0.43
POLR2J3-207ENST00000503564 SLC35F4A4IF30 521 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms