RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 TATDN3Q17R31 274 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 CCDC57Q2TAC2 916 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 RIPPLY2Q5TAB7 128 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 LIPNQ5VXI9 398 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 CXCL17Q6UXB2 119 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 CYS1Q717R9 158 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 C16orf62Q7Z3J2 963 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 ZNF573Q86YE8 665 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 FADS6Q8N9I5 356 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 OR10H4Q8NGA5 316 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 OR10T2Q8NGX3 314 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 CNIH3Q8TBE1 160 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 ZNF564Q8TBZ8 553 aaPredicted RBP2.27□□□□□ -2.05
GYPB-203ENST00000503255 IMMP1LQ96LU5 166 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 C16orf45Q96MC5 204 aaPredicted RBP2.27□□□□□ -2.05
GYPB-203ENST00000503255 IL4I1Q96RQ9 567 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 FANCFQ9NPI8 374 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 ONECUT1Q9UBC0 465 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 SCN11AQ9UI33 1791 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 CENPFP49454 3210 aa2.27□□□□□ -2.05
GYPB-203ENST00000503255 BRCA1P38398 1863 aaKnown RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 FLT4P35916 1363 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 PKD1L3Q7Z443 1732 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 IGHV1OR15-1A0A075B7D0 117 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 LOC100131303A0A0U1RQF7 123 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 RGSL1A5PLK6 1076 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 PP2D1A8MPX8 630 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 A8MUI8 341 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 SDHDO14521 159 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 TPST2O60704 377 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 DIRAS3O95661 229 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 LALBAP00709 142 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 ASNSP08243 561 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 HOXC4P09017 264 aaPredicted RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 IGLL1P15814 213 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 PGCP20142 388 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 YWHABP31946 246 aaKnown RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 DLSTP36957 453 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 STARP49675 285 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 AP3M2P53677 418 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 TIMM10P62072 90 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 CHRNB3Q05901 458 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 ST3GAL3Q11203 375 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 RAB40BQ12829 278 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 LAGE3Q14657 143 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 MESDQ14696 234 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 RABGAP1LQ5R372 815 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 FAM120AOSQ5T036 256 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 SPATA46Q5T0L3 261 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 OTPQ5XKR4 325 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 ASPHD2Q6ICH7 369 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 ZNF530Q6P9A1 599 aaPredicted RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 WDR74Q6RFH5 385 aaPredicted RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 ARCQ7LC44 396 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 ZNF589Q86UQ0 364 aaPredicted RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 C17orf82Q86X59 251 aaPredicted RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 NRMQ8IXM6 262 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 RNF175Q8N4F7 328 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 DHRSXQ8N5I4 330 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 ALLCQ8N6M5 410 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 OR2AP1Q8NGE2 309 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 NANPQ8TBE9 248 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 M1APQ8TC57 530 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 PNPT1Q8TCS8 783 aaKnown RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 DNAJA4Q8WW22 397 aaPredicted RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 ARNTL2Q8WYA1 636 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 FRAT1Q92837 279 aaPredicted RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 MARC2Q969Z3 335 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 HAVCR1Q96D42 359 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 MCHR1Q99705 422 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 CITED1Q99966 193 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 THUMPD2Q9BTF0 503 aaKnown RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 PLSCR3Q9NRY6 295 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 NUDT15Q9NV35 164 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 MARCH5Q9NX47 278 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 CD274Q9NZQ7 290 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 RIMS3Q9UJD0 308 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 ALG6Q9Y672 507 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 PAPPAQ13219 1627 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 DICER1Q9UPY3 1922 aaKnown RBP2.26□□□□□ -2.05
GYPB-203ENST00000503255 ARFGEF1Q9Y6D6 1849 aa2.26□□□□□ -2.05
GYPB-203ENST00000503255 USP47Q96K76 1375 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 C5P01031 1676 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 MYOM1P52179 1685 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 SF3B1O75533 1304 aaKnown RBP eCLIP2.25□□□□□ -2.052e-6■■■■■ 43.1
GYPB-203ENST00000503255 PCDH11XQ9BZA7 1347 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 E7ESA3 106 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 PPIAL4DF5H284 164 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 MSH4O15457 936 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 EMC8O43402 210 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 HCN1O60741 890 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 MMP23AO75900 390 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 IGF1P05019 195 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 H2BFMP0C1H6 154 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 OR8U8P0C7N1 319 aa2.25□□□□□ -2.05
GYPB-203ENST00000503255 RNH1P13489 461 aaKnown RBP2.25□□□□□ -2.05
GYPB-203ENST00000503255 NCF1P14598 390 aaPredicted RBP2.25□□□□□ -2.05
GYPB-203ENST00000503255 CD86P42081 329 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms