RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 OR2L13Q8N349 312 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 MMGT1Q8N4V1 131 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF614Q8N883 585 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 LINC00482Q8N8I6 264 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 STEAP2Q8NFT2 490 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 B4GALNT2Q8NHY0 566 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 ABHD3Q8WU67 409 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 JADE3Q92613 823 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 CAVIN3Q969G5 261 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 DNAJA3Q96EY1 480 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 C11orf24Q96F05 449 aaPredicted RBP4.87□□□□□ -1.63
SPTA1-209ENST00000498708 REXO5Q96IC2 774 aaKnown RBP4.87□□□□□ -1.63
SPTA1-209ENST00000498708 ADGRG7Q96K78 797 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 KLHL15Q96M94 604 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 AMDHD1Q96NU7 426 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF382Q96SR6 550 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 LMF2Q9BU23 707 aaKnown RBP4.87□□□□□ -1.63
SPTA1-209ENST00000498708 TRAF4Q9BUZ4 470 aaPredicted RBP4.87□□□□□ -1.63
SPTA1-209ENST00000498708 C1QTNF3Q9BXJ4 246 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 SRXN1Q9BYN0 137 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 FAM107BQ9H098 131 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 TMPRSS5Q9H3S3 457 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.87□□□□□ -1.63
SPTA1-209ENST00000498708 CISD1Q9NZ45 108 aaKnown RBP4.87□□□□□ -1.63
SPTA1-209ENST00000498708 SH3BP4Q9P0V3 963 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 FBLN5Q9UBX5 448 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 PRSS50Q9UI38 385 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 ING1Q9UK53 422 aaPredicted RBP4.87□□□□□ -1.63
SPTA1-209ENST00000498708 NFU1Q9UMS0 254 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 PCDHB10Q9UN67 800 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 ABCG2Q9UNQ0 655 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 PTGDR2Q9Y5Y4 395 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 PCNX3Q9H6A9 2034 aa4.87□□□□□ -1.63
SPTA1-209ENST00000498708 A0A087WUV0 522 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 A0A0A6YYJ9 748 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 EXOC1LA0A1B0GW35 172 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 C7orf72A4D263 438 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 CCDC151A5D8V7 595 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 ALG1L2C9J202 215 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 SLCO1B7G3V0H7 640 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 M0QX08 132 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 SCDO00767 359 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 PDPK1O15530 556 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 EFNA2O43921 213 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 SEC22BO75396 215 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 SKAP2O75563 359 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 GCM2O75603 506 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 URI1O94763 535 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 NKX2-2O95096 273 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 PSMG1O95456 288 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 IGHV3-9P01782 118 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 ENO1P06733 434 aaKnown RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 ALOX5P09917 674 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 IDO1P14902 403 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF17P17021 662 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 PSMB1P20618 241 aaKnown RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 ME2P23368 584 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 ATP5F1P24539 256 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 EDNRAP25101 427 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 MANFP55145 182 aaKnown RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 PKNOX1P55347 436 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 DSCR9P59020 149 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 TUBA1BP68363 451 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 PSPHP78330 225 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF117Q03924 483 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 BSPH1Q075Z2 132 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 LGALS3BPQ08380 585 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 LCP2Q13094 533 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 RCN1Q15293 331 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 TOMM34Q15785 309 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF239Q16600 458 aaKnown RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 DUSP5Q16690 384 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 PLPPR5Q32ZL2 321 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 TMEM176BQ3YBM2 270 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 ZNF672Q499Z4 452 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 GLE1Q53GS7 698 aaKnown RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 CLEC6AQ6EIG7 209 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 GTF2IRD2BQ6EKJ0 949 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 NOXRED1Q6NXP6 359 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 LRIG3Q6UXM1 1119 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 TFAP2EQ6VUC0 442 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 ETV3LQ6ZN32 361 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 ESPNLQ6ZVH7 1005 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 TUBA1AQ71U36 451 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 FCRLAQ7L513 359 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 BHLHA15Q7RTS1 189 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 GTF2IRD2Q86UP8 949 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 GABRG1Q8N1C3 465 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 GTPBP8Q8N3Z3 284 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 TMCO5AQ8N6Q1 288 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 COX18Q8N8Q8 333 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 SLC16A11Q8NCK7 471 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 PHOSPHO1Q8TCT1 267 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 C10orf105Q8TEF2 133 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 LZICQ8WZA0 190 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 PROX1Q92786 737 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 CDS1Q92903 461 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 KISS1RQ969F8 398 aaPredicted RBP4.86□□□□□ -1.63
SPTA1-209ENST00000498708 TSSK3Q96PN8 268 aa4.86□□□□□ -1.63
SPTA1-209ENST00000498708 C1QTNF6Q9BXI9 259 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms