RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 MAGEA8P43361 318 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 NKX6-1P78426 367 aaPredicted RBP14.26□□□□□ -0.13
NR1H3-227ENST00000498548 HOXC5Q00444 222 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 ITGADQ13349 1161 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 CAPRIN1Q14444 709 aaKnown RBP14.26□□□□□ -0.13
NR1H3-227ENST00000498548 TAB1Q15750 504 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 ZNF704Q6ZNC4 412 aaPredicted RBP14.26□□□□□ -0.13
NR1H3-227ENST00000498548 GALNT5Q7Z7M9 940 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 KRTAP1-3Q8IUG1 177 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 PMM1Q92871 262 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 KISS1RQ969F8 398 aaPredicted RBP14.26□□□□□ -0.13
NR1H3-227ENST00000498548 DDIT4LQ96D03 193 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 CCL19Q99731 98 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 ADAM19Q9H013 955 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 OR10A4Q9H209 315 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 ARGLU1Q9NWB6 273 aaPredicted RBP14.26□□□□□ -0.13
NR1H3-227ENST00000498548 ZNF232Q9UNY5 417 aa14.26□□□□□ -0.13
NR1H3-227ENST00000498548 NOSIPQ9Y314 301 aaKnown RBP14.26□□□□□ -0.13
NR1H3-227ENST00000498548 TMEM247A6NEH6 219 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 FAAHO00519 579 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 NCF2P19878 526 aaPredicted RBP14.25□□□□□ -0.13
NR1H3-227ENST00000498548 CXCR1P25024 350 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 CLK1P49759 484 aaKnown RBP14.25□□□□□ -0.13
NR1H3-227ENST00000498548 LARS2Q15031 903 aaKnown RBP14.25□□□□□ -0.13
NR1H3-227ENST00000498548 STK11Q15831 433 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 ZNF311Q5JNZ3 666 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 Q6ZT83 130 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 SERPINA11Q86U17 422 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 ZNF440Q8IYI8 595 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 UBE2J2Q8N2K1 259 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 NFKBIDQ8NI38 313 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 MAGEB18Q96M61 343 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 SPATA9Q9BWV2 254 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 RSPO3Q9BXY4 272 aaPredicted RBP14.25□□□□□ -0.13
NR1H3-227ENST00000498548 GSX1Q9H4S2 264 aaPredicted RBP14.25□□□□□ -0.13
NR1H3-227ENST00000498548 VIPAS39Q9H9C1 493 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 VAPAQ9P0L0 249 aa14.25□□□□□ -0.13
NR1H3-227ENST00000498548 ITPR3Q14573 2671 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 IGKV3D-15A0A087WSY6 115 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 ZNF208O43345 1280 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 SMPD2O60906 423 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 UQCRBP14927 111 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 FKBP2P26885 142 aaKnown RBP14.24□□□□□ -0.13
NR1H3-227ENST00000498548 ADSLP30566 484 aaPredicted RBP14.24□□□□□ -0.13
NR1H3-227ENST00000498548 FOXG1P55316 489 aaPredicted RBP14.24□□□□□ -0.13
NR1H3-227ENST00000498548 SLC35A1P78382 337 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 CEACAM7Q14002 265 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 SQLEQ14534 574 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 P2RY6Q15077 328 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 PDK3Q15120 406 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 OR7A5Q15622 319 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 LRIF1Q5T3J3 769 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 RNF220Q5VTB9 566 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 P3H2Q8IVL5 708 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 TMEM99Q8N816 258 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 PIGXQ8TBF5 258 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 HSD17B8Q92506 261 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 AKAP1Q92667 903 aaKnown RBP eCLIP14.24□□□□□ -0.13
NR1H3-227ENST00000498548 NEUROG1Q92886 237 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 PIGTQ969N2 578 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 PERPQ96FX8 193 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 NAA11Q9BSU3 229 aaPredicted RBP14.24□□□□□ -0.13
NR1H3-227ENST00000498548 RAD21L1Q9H4I0 556 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 IKZF5Q9H5V7 419 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 A4GALTQ9NPC4 353 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 THUMPD1Q9NXG2 353 aaKnown RBP14.24□□□□□ -0.13
NR1H3-227ENST00000498548 EMC3Q9P0I2 261 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 DCTN4Q9UJW0 460 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 TRAPPC4Q9Y296 219 aa14.24□□□□□ -0.13
NR1H3-227ENST00000498548 C5orf58C9J3I9 102 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 AKR7A3O95154 331 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 PGM3O95394 542 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 THBS1P07996 1170 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 BMP2P12643 396 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 ATP4BP51164 291 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 NR1H2P55055 460 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 COPZ1P61923 177 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 H3F3AP84243 136 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 FADDQ13158 208 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 NCMAPQ5T1S8 102 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 GCNT6Q5T4J0 391 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 WBP2NLQ6ICG8 309 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 ZNF433Q8N7K0 673 aaPredicted RBP14.23□□□□□ -0.13
NR1H3-227ENST00000498548 OR52E4Q8NGH9 312 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 LILRB1Q8NHL6 650 aaPredicted RBP14.23□□□□□ -0.13
NR1H3-227ENST00000498548 TMEM204Q9BSN7 226 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 PRR14Q9BWN1 585 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 CACYBPQ9HB71 228 aaKnown RBP14.23□□□□□ -0.13
NR1H3-227ENST00000498548 BCL2L10Q9HD36 194 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 NPHS2Q9NP85 383 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.23□□□□□ -0.13
NR1H3-227ENST00000498548 IFT52Q9Y366 437 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 ROS1P08922 2347 aa14.23□□□□□ -0.13
NR1H3-227ENST00000498548 A0A1W2PR80 420 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 DPRXA6NFQ7 191 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 CLOCKO15516 846 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 DNPH1O43598 174 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 MRPL33O75394 65 aaKnown RBP14.22□□□□□ -0.13
NR1H3-227ENST00000498548 RAD51DO75771 328 aa14.22□□□□□ -0.13
NR1H3-227ENST00000498548 ARAFP10398 606 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 345.1 ms