RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 ZDHHC24Q6UX98 284 aa11.97□□□□□ -0.49
RNF220-218ENST00000497469 Q6YL49 198 aa11.97□□□□□ -0.49
RNF220-218ENST00000497469 ADAMTSL5Q6ZMM2 481 aa11.97□□□□□ -0.49
RNF220-218ENST00000497469 PYROXD1Q8WU10 500 aa11.97□□□□□ -0.49
RNF220-218ENST00000497469 PIK3R3Q92569 461 aa11.97□□□□□ -0.49
RNF220-218ENST00000497469 TRIM44Q96DX7 344 aaPredicted RBP11.97□□□□□ -0.49
RNF220-218ENST00000497469 CD244Q9BZW8 370 aa11.97□□□□□ -0.49
RNF220-218ENST00000497469 NOX3Q9HBY0 568 aa11.97□□□□□ -0.49
RNF220-218ENST00000497469 CRNNQ9UBG3 495 aaPredicted RBP11.97□□□□□ -0.49
RNF220-218ENST00000497469 ACTL7BQ9Y614 415 aa11.97□□□□□ -0.49
RNF220-218ENST00000497469 FRAS1Q86XX4 4008 aa11.97□□□□□ -0.49
RNF220-218ENST00000497469 A0A096LPE4 126 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 A0A1W2PPZ6 126 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 TCRBV9S1A1TA0A576 114 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 CLDN25C9JDP6 229 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 KIF2AO00139 706 aaPredicted RBP11.96□□□□□ -0.49
RNF220-218ENST00000497469 IGLV1-44P01699 117 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 DIO1P49895 249 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 PLTPP55058 493 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 SELENBP1Q13228 472 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 OR4D1Q15615 310 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 CPSF6Q16630 551 aaKnown RBP eCLIP11.96□□□□□ -0.49
RNF220-218ENST00000497469 PGBD2Q6P3X8 592 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 Q6ZTK2 550 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 ZAR1Q86SH2 424 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 CCDC103Q8IW40 242 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 OR10S1Q8NGN2 331 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 FBXO25Q8TCJ0 367 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 ARL5BQ96KC2 179 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 ACSS3Q9H6R3 686 aa11.96□□□□□ -0.49
RNF220-218ENST00000497469 MRTO4Q9UKD2 239 aaKnown RBP11.96□□□□□ -0.49
RNF220-218ENST00000497469 UTP11Q9Y3A2 253 aaKnown RBP11.96□□□□□ -0.49
RNF220-218ENST00000497469 EIF3HO15372 352 aaKnown RBP eCLIP11.95□□□□□ -0.5
RNF220-218ENST00000497469 LGI1O95970 557 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 IGHMP01871 453 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 PSMD4P55036 377 aaKnown RBP11.95□□□□□ -0.5
RNF220-218ENST00000497469 TAS2R39P59534 338 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 SEC61A1P61619 476 aaKnown RBP11.95□□□□□ -0.5
RNF220-218ENST00000497469 SLC7A5Q01650 507 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 ZNF117Q03924 483 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 NPRL3Q12980 569 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 HERPUD1Q15011 391 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 GLE1Q53GS7 698 aaKnown RBP11.95□□□□□ -0.5
RNF220-218ENST00000497469 FAM205BPQ63HN1 556 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 DYRK2Q92630 601 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 EXOSC8Q96B26 276 aaKnown RBP11.95□□□□□ -0.5
RNF220-218ENST00000497469 RAB17Q9H0T7 212 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 RHOJQ9H4E5 214 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 PRDM13Q9H4Q3 707 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 CAB39LQ9H9S4 337 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 PALMDQ9NP74 551 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 PSME2Q9UL46 239 aa11.95□□□□□ -0.5
RNF220-218ENST00000497469 MTO1Q9Y2Z2 717 aaKnown RBP11.95□□□□□ -0.5
RNF220-218ENST00000497469 URI1O94763 535 aaPredicted RBP11.94□□□□□ -0.5
RNF220-218ENST00000497469 ZNF432O94892 652 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 WISP3O95389 354 aaPredicted RBP11.94□□□□□ -0.5
RNF220-218ENST00000497469 GABRA3P34903 492 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 MSX2P35548 267 aaPredicted RBP11.94□□□□□ -0.5
RNF220-218ENST00000497469 CKAP4Q07065 602 aaKnown RBP11.94□□□□□ -0.5
RNF220-218ENST00000497469 NSUN5P1Q3KNT7 163 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 ZFAND6Q6FIF0 208 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 CBLN3Q6UW01 205 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 C1orf174Q8IYL3 243 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 PDPRQ8NCN5 879 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 OR1K1Q8NGR3 316 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 TM4SF18Q96CE8 201 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 ERP27Q96DN0 273 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 QRSL1Q9H0R6 528 aaKnown RBP11.94□□□□□ -0.5
RNF220-218ENST00000497469 VPS11Q9H270 941 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 CRLF2Q9HC73 371 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 OBP2BQ9NPH6 170 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 NSMCE4AQ9NXX6 385 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 RPUSD1Q9UJJ7 312 aaKnown RBP11.94□□□□□ -0.5
RNF220-218ENST00000497469 PCDHGA11Q9Y5H2 935 aa11.94□□□□□ -0.5
RNF220-218ENST00000497469 IGHV1-69-2A0A0G2JMI3 117 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 ZNF816-ZNF321PA0A0X1KG74 233 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 A0A1W2PPW3 197 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 FAM159BA6NKW6 160 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 SULT2B1O00204 365 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 GPR171O14626 319 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 PLOD3O60568 738 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 COQ9O75208 318 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 LYL1P12980 280 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 PRKCAP17252 672 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 CD80P33681 288 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 EVX1P49640 407 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 PDK3Q15120 406 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 NDUFAF6Q330K2 333 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 GLIPR1L2Q4G1C9 344 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 C8orf74Q6P047 294 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 C3orf62Q6ZUJ4 267 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 MTDHQ86UE4 582 aaKnown RBP11.93□□□□□ -0.5
RNF220-218ENST00000497469 TEX9Q8N6V9 391 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 ZSCAN4Q8NAM6 433 aaPredicted RBP11.93□□□□□ -0.5
RNF220-218ENST00000497469 WDR20Q8TBZ3 569 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 RAB1CQ92928 201 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 TIMD4Q96H15 378 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 BBS4Q96RK4 519 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 RBBP8Q99708 897 aa11.93□□□□□ -0.5
RNF220-218ENST00000497469 MMP28Q9H239 520 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms