RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 AIG1Q9NVV5 245 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 TMEM181Q9P2C4 612 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 TRAPPC4Q9Y296 219 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 TMED7-TICAM2A0A0A6YYA0 188 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 AGAP5A6NIR3 686 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 AP3D1O14617 1153 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 EIF1BO60739 113 aaKnown RBP15.11■□□□□ 0.01
SMC4-226ENST00000497311 CD8AP01732 235 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 PGRP06401 933 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 CHRM4P08173 479 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 IL7RP16871 459 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 IL12AP29459 219 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 ACVR1BP36896 505 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 POLR2HP52434 150 aaKnown RBP15.11■□□□□ 0.01
SMC4-226ENST00000497311 HHATQ5VTY9 493 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 TMEM108Q6UXF1 575 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 DTX2Q86UW9 622 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 MAPK1IP1LQ8NDC0 245 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 OR52N5Q8NH56 324 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 WDR60Q8WVS4 1066 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 PMM1Q92871 262 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 HS6ST2Q96MM7 605 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 OR52E6Q96RD3 313 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 ZBTB18Q99592 522 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 NAA11Q9BSU3 229 aaPredicted RBP15.11■□□□□ 0.01
SMC4-226ENST00000497311 INPP5KQ9BT40 448 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 REG4Q9BYZ8 158 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 BARX1Q9HBU1 254 aaPredicted RBP15.11■□□□□ 0.01
SMC4-226ENST00000497311 TAS2R16Q9NYV7 291 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 MALT1Q9UDY8 824 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 OSGIN1Q9UJX0 560 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 MGAT4BQ9UQ53 548 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 TMED7Q9Y3B3 224 aa15.11■□□□□ 0.01
SMC4-226ENST00000497311 ANK3Q12955 4377 aaKnown RBP15.11■□□□□ 0.01
SMC4-226ENST00000497311 GOLGA8QA0A0J9YX86 632 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 TMEM72A0PK05 275 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 GOLGA8OA6NCC3 632 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 KIAA1324LA8MWY0 1029 aaPredicted RBP15.1■□□□□ 0.01
SMC4-226ENST00000497311 GOLGA8NF8WBI6 632 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 SDHDO14521 159 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 ZNF208O43345 1280 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 IGHV4-39P01824 125 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 GSNP06396 782 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 THBS1P07996 1170 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 NR2F1P10589 423 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 UQCRBP14927 111 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 TACR3P29371 465 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 NTF4P34130 210 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 CDKN2CP42773 168 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 SLC1A3P43003 542 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 SLC35A1P78382 337 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 H3F3AP84243 136 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 AGAP6Q5VW22 663 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 OR7E24Q6IFN5 339 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 KLHL17Q6TDP4 642 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 ANKRD42Q8N9B4 389 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 GPR45Q9Y5Y3 372 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 SLC25A15Q9Y619 301 aa15.1■□□□□ 0.01
SMC4-226ENST00000497311 PLCE1Q9P212 2302 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 CFAP73A6NFT4 308 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 TRPC5OSA6NMA1 111 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 FAAHO00519 579 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 HDAC3O15379 428 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 NDUFS7O75251 213 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 KRT75O95678 551 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 DBIP07108 87 aaKnown RBP15.09■□□□□ 0.01
SMC4-226ENST00000497311 IMPDH2P12268 514 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 RPS4Y1P22090 263 aaKnown RBP15.09■□□□□ 0.01
SMC4-226ENST00000497311 PTAFRP25105 342 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 EPHA3P29320 983 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 ZNF83P51522 516 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 MAP2K6P52564 334 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 KRTAP1-1Q07627 177 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 DMTNQ08495 405 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 GABRA6Q16445 453 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 COX20Q5RI15 118 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 MRPL2Q5T653 305 aaKnown RBP15.09■□□□□ 0.01
SMC4-226ENST00000497311 SLC22A25Q6T423 547 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 CASP12Q6UXS9 341 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 GLB1L3Q8NCI6 653 aaPredicted RBP15.09■□□□□ 0.01
SMC4-226ENST00000497311 PNPT1Q8TCS8 783 aaKnown RBP15.09■□□□□ 0.01
SMC4-226ENST00000497311 MUS81Q96NY9 551 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 WDR55Q9H6Y2 383 aaPredicted RBP15.09■□□□□ 0.01
SMC4-226ENST00000497311 THAP1Q9NVV9 213 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 PARPBPQ9NWS1 579 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 UPB1Q9UBR1 384 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 GDF2Q9UK05 429 aaPredicted RBP15.09■□□□□ 0.01
SMC4-226ENST00000497311 POU2F3Q9UKI9 436 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 SLC9A8Q9Y2E8 581 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 ABCA1O95477 2261 aa15.09■□□□□ 0.01
SMC4-226ENST00000497311 SONP18583 2426 aaKnown RBP15.08■□□□□ 0.01
SMC4-226ENST00000497311 ALPK2Q86TB3 2170 aa15.08■□□□□ 0.01
SMC4-226ENST00000497311 A0A1W2PR80 420 aa15.08■□□□□ 0
SMC4-226ENST00000497311 RFXANKO14593 260 aa15.08■□□□□ 0
SMC4-226ENST00000497311 TP53P04637 393 aaPredicted RBP15.08■□□□□ 0
SMC4-226ENST00000497311 KITP10721 976 aa15.08■□□□□ 0
SMC4-226ENST00000497311 PTNP21246 168 aa15.08■□□□□ 0
SMC4-226ENST00000497311 CD40P25942 277 aa15.08■□□□□ 0
SMC4-226ENST00000497311 EPS8Q12929 822 aa15.08■□□□□ 0
SMC4-226ENST00000497311 NRF1Q16656 503 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms