RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 VRK2Q86Y07 508 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 TGIF2LYQ8IUE0 185 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 SVOPLQ8N434 492 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 EIF1ADQ8N9N8 165 aaKnown RBP2.35□□□□□ -2.03
PHC3-216ENST00000497171 ZNF740Q8NDX6 193 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 BBS1Q8NFJ9 593 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 OR2AP1Q8NGE2 309 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 OR52I1Q8NGK6 324 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 ZNF564Q8TBZ8 553 aaPredicted RBP2.35□□□□□ -2.03
PHC3-216ENST00000497171 HTR3CQ8WXA8 447 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 DCUN1D4Q92564 292 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 EFHD2Q96C19 240 aaPredicted RBP2.35□□□□□ -2.03
PHC3-216ENST00000497171 FAM122AQ96E09 287 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 TCEANC2Q96MN5 208 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 ZIM3Q96PE6 472 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 CLCC1Q96S66 551 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 CCNL2Q96S94 520 aaPredicted RBP2.35□□□□□ -2.03
PHC3-216ENST00000497171 TBX15Q96SF7 602 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 KLHDC3Q9BQ90 382 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 NIPSNAP3BQ9BS92 247 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 MAGT1Q9H0U3 335 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 RBKSQ9H477 322 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 LRRC40Q9H9A6 602 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 NUDT15Q9NV35 164 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 MARCH5Q9NX47 278 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 HOXC10Q9NYD6 342 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 BTNL2Q9UIR0 455 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 PRPF19Q9UMS4 504 aaKnown RBP2.35□□□□□ -2.03
PHC3-216ENST00000497171 RASD1Q9Y272 281 aa2.35□□□□□ -2.03
PHC3-216ENST00000497171 RPAP1Q9BWH6 1393 aaPredicted RBP2.35□□□□□ -2.03
PHC3-216ENST00000497171 CHD4Q14839 1912 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 COL4A4P53420 1690 aaPredicted RBP2.34□□□□□ -2.03
PHC3-216ENST00000497171 A0A0J9YXY3 114 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 IQANK1A0A1B0GTG1 560 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 A8MXQ7 604 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 IDSB3KWA1 339 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 ABCD4O14678 606 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 UGT1A9O60656 530 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 ECI2O75521 394 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 OXSR1O95747 527 aaPredicted RBP2.34□□□□□ -2.03
PHC3-216ENST00000497171 GNA11P29992 359 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 SHMT2P34897 504 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 UGT1A5P35504 534 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 MAGEA8P43361 318 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 CAV2P51636 162 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 ATP1B3P54709 279 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 LYZP61626 148 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 SELENOTP62341 195 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 ORC2Q13416 577 aaPredicted RBP2.34□□□□□ -2.03
PHC3-216ENST00000497171 HERPUD1Q15011 391 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 DPYSL2Q16555 572 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 SAMD4BQ5PRF9 694 aaKnown RBP2.34□□□□□ -2.03
PHC3-216ENST00000497171 SPATA46Q5T0L3 261 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 PDZK1Q5T2W1 519 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 OR4F3Q6IEY1 312 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 WDR74Q6RFH5 385 aaPredicted RBP2.34□□□□□ -2.03
PHC3-216ENST00000497171 UNQ9370/PRO34162Q6UXP9 181 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 PP632Q6XCG6 107 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 SCARA5Q6ZMJ2 495 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 Q6ZN92 141 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 NLRP9Q7RTR0 991 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 ZNF571Q7Z3V5 609 aaPredicted RBP2.34□□□□□ -2.03
PHC3-216ENST00000497171 FAM220AQ7Z4H9 259 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 ERI1Q8IV48 349 aaKnown RBP2.34□□□□□ -2.03
PHC3-216ENST00000497171 ZNF679Q8IYX0 411 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 OR2L13Q8N349 312 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 FTMTQ8N4E7 242 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 BHLHE23Q8NDY6 225 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 OR5D13Q8NGL4 314 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 CXorf40BQ96DE9 158 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 SEC22AQ96IW7 307 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 SLC38A2Q96QD8 506 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 PSKH2Q96QS6 385 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 RNF2Q99496 336 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 COPS8Q99627 209 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 GCOM2Q9BZD3 368 aaPredicted RBP2.34□□□□□ -2.03
PHC3-216ENST00000497171 RAB34Q9BZG1 259 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 REEP4Q9H6H4 257 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 PDFQ9HBH1 243 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 SMOXQ9NWM0 555 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 BFARQ9NZS9 450 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 TMEM9Q9P0T7 183 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 DCDC2Q9UHG0 476 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 STAP1Q9ULZ2 295 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 TMCO1Q9UM00 188 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 POLDIP2Q9Y2S7 368 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 V9GY05 133 aa2.34□□□□□ -2.03
PHC3-216ENST00000497171 RAI1Q7Z5J4 1906 aaPredicted RBP2.34□□□□□ -2.04
PHC3-216ENST00000497171 PLEKHH1Q9ULM0 1364 aa2.34□□□□□ -2.04
PHC3-216ENST00000497171 TRAV26-1A0A087WT03 109 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 A0A1B0GVL5 298 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 GOLGA8SH3BPF8 625 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 DCTN6O00399 190 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 EMC8O43402 210 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 MBTPS2O43462 519 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 MMP23AO75900 390 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 SNAPINO95295 136 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 TIMP1P01033 207 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 P04436 131 aa2.33□□□□□ -2.04
PHC3-216ENST00000497171 POU2F1P14859 743 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms