RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.04□□□□□ -1.44
CHCHD3-206ENST00000496427 IGKV3D-15A0A087WSY6 115 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 EXOC1LA0A1B0GW35 172 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 CCDC151A5D8V7 595 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 NPIPB9F8W1W9 429 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 PDLIM1O00151 329 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 NDUFS8O00217 210 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 KLF11O14901 512 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 ZNF264O43296 627 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 BCAS1O75363 584 aaPredicted RBP6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 SKAP2O75563 359 aaPredicted RBP6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 UBTFL6P0CB48 400 aaPredicted RBP6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 TFPIP10646 304 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 CDH2P19022 906 aaPredicted RBP6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 CCNA2P20248 432 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 APEX1P27695 318 aaKnown RBP6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 LCN1P31025 176 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 ATP12AP54707 1039 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 SESN3P58005 492 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 SNRPD2P62316 118 aaKnown RBP6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 RPS26P62854 115 aaKnown RBP6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 ACTG1P63261 375 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 TUBA1BP68363 451 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 TUBA4AP68366 448 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 SKP2Q13309 424 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 PDE7AQ13946 482 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 CBFBQ13951 182 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 GALNTL6Q49A17 601 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 HIKESHIQ53FT3 197 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 SYT14P1Q58G82 188 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 TSPO2Q5TGU0 170 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 LIPMQ5VYY2 423 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 TMPPEQ6ZT21 453 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 FRMD7Q6ZUT3 714 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 TUBA1AQ71U36 451 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 SPATA19Q7Z5L4 167 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 SLC22A9Q8IVM8 553 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 ZCCHC24Q8N2G6 241 aaKnown RBP6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 C17orf53Q8N3J3 647 aaPredicted RBP6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 OR7A2PQ8NGA2 310 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 OR5W2Q8NH69 310 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 FAM76AQ8TAV0 307 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 ADAMTS15Q8TE58 950 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 PMM1Q92871 262 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 FCRL1Q96LA6 429 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 MUS81Q96NY9 551 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 OR7D2Q96RA2 312 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 SNX18Q96RF0 628 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 STACQ99469 402 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 CCT7Q99832 543 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 SEC61A2Q9H9S3 476 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 FKRPQ9H9S5 495 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 HHATLQ9HCP6 504 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 RRAGDQ9NQL2 400 aaPredicted RBP6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 CTPS2Q9NRF8 586 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 DUSP22Q9NRW4 184 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 SLC7A10Q9NS82 523 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 C1orf109Q9NX04 203 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 EMC3Q9P0I2 261 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 MALT1Q9UDY8 824 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 TMEFF2Q9UIK5 374 aaPredicted RBP6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 KCNE5Q9UJ90 142 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 ZNF180Q9UJW8 692 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 DTNAQ9Y4J8 743 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 TGP01266 2768 aa6.03□□□□□ -1.44
CHCHD3-206ENST00000496427 PRKDCP78527 4128 aaKnown RBP6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 PKD1L1Q8TDX9 2849 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 A0A087WUV0 522 aaPredicted RBP6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 IGHV1-18A0A0C4DH31 117 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 LOC390937A0A1W2PQ73 354 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 SERINC4A6NH21 518 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 LYNX1G3V0Z9 82 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 G3V2L1 256 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 H3BNH8 94 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 ETV2O00321 342 aaPredicted RBP6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 EIF4E2O60573 245 aaKnown RBP6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 TBX19O60806 448 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 MRPL33O75394 65 aaKnown RBP6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 STAMBPO95630 424 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 HSPA4LO95757 839 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 C6orf47O95873 294 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 GSTA1P08263 222 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 LINC00032P0C843 101 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 LYNX1P0DP58 116 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 PRPH2P23942 346 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 ECHS1P30084 290 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 SOAT1P35610 550 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 OR2B6P58173 313 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 CSNK2A1P68400 391 aaPredicted RBP6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 LGALS3BPQ08380 585 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 GPR68Q15743 365 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 ATP6AP1LQ52LC2 224 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 RFTN2Q52LD8 501 aaPredicted RBP6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 ZCCHC12Q6PEW1 402 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 BHLHB9Q6PI77 547 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 SSX8Q7RTT4 187 aa6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 MTDHQ86UE4 582 aaKnown RBP6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 MYPOPQ86VE0 399 aaPredicted RBP6.02□□□□□ -1.45
CHCHD3-206ENST00000496427 CLEC4FQ8N1N0 589 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms