RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 GDE1Q9NZC3 331 aa8.4□□□□□ -1.06
HPS4-217ENST00000496385 IL17CQ9P0M4 197 aa8.4□□□□□ -1.06
HPS4-217ENST00000496385 H2AFY2Q9P0M6 372 aaPredicted RBP8.4□□□□□ -1.06
HPS4-217ENST00000496385 A4GNTQ9UNA3 340 aa8.4□□□□□ -1.06
HPS4-217ENST00000496385 PCDHGA5Q9Y5G8 931 aa8.4□□□□□ -1.06
HPS4-217ENST00000496385 MUC3AQ02505 3323 aa8.4□□□□□ -1.06
HPS4-217ENST00000496385 DOCK6Q96HP0 2047 aa8.4□□□□□ -1.07
HPS4-217ENST00000496385 PLXNA3P51805 1871 aa8.4□□□□□ -1.07
HPS4-217ENST00000496385 H0YIV9 168 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 SLC16A5O15375 505 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 SH3BGRLO75368 114 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 SLC25A12O75746 678 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 LATS1O95835 1130 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ACP5P13686 325 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 PRG2P13727 222 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 CBR1P16152 277 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ACHEP22303 614 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 UQCRC2P22695 453 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 SDHAP31040 664 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 RAE1P78406 368 aaKnown RBP8.39□□□□□ -1.07
HPS4-217ENST00000496385 TFF2Q03403 129 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 CHIT1Q13231 466 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 PDE7AQ13946 482 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 TMPRSS11FQ6ZWK6 438 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 TMEM200AQ86VY9 491 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 GID4Q8IVV7 300 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 GPR32P1Q8NGA4 272 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 OR5D16Q8NGK9 328 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 XAGE5Q8WWM1 108 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 PHYHIPQ92561 330 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 FNDC11Q9BVV2 318 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 TAS2R10Q9NYW0 307 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 PATJQ8NI35 1801 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 POM121BA6NF01 834 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 E7EQ34 232 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ACOT7O00154 380 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 GOSR2O14653 212 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 FLRT2O43155 660 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 C6orf47O95873 294 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 MT-ND5P03915 603 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ATF1P18846 271 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ITGA3P26006 1051 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 TIA1P31483 386 aaKnown RBP eCLIP8.39□□□□□ -1.07
HPS4-217ENST00000496385 GPR15P49685 360 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 PNLIPRP2P54317 469 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 SORDQ00796 357 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 TSPAN31Q12999 210 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 HMGN3Q15651 99 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ZNF239Q16600 458 aaKnown RBP8.39□□□□□ -1.07
HPS4-217ENST00000496385 C9orf152Q5JTZ5 239 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 SDHAF4Q5VUM1 108 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 TMEM244Q5VVB8 128 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 GLT8D1Q68CQ7 371 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 RAB12Q6IQ22 244 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 PRSS45Q7RTY3 260 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 MAFAQ8NHW3 353 aaPredicted RBP8.39□□□□□ -1.07
HPS4-217ENST00000496385 PIGKQ92643 395 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 MRPS31Q92665 395 aaKnown RBP8.39□□□□□ -1.07
HPS4-217ENST00000496385 RAB3CQ96E17 227 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 WDR89Q96FK6 387 aaPredicted RBP8.39□□□□□ -1.07
HPS4-217ENST00000496385 TEAD3Q99594 435 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ACBD6Q9BR61 282 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ADAM19Q9H013 955 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 MIEF1Q9NQG6 463 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 TAS2R8Q9NYW2 309 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 TNFSF18Q9UNG2 199 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 MAP4K5Q9Y4K4 846 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 IRAK3Q9Y616 596 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 RNF222A6NCQ9 220 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ACOD1A6NK06 481 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ANHXE9PGG2 379 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 DVL2O14641 736 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 SURF4O15260 269 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 GJB3O75712 270 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ADH1AP07327 375 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 RAB40ALP0C0E4 278 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 OR8U8P0C7N1 319 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ZNF14P17017 642 aaPredicted RBP8.39□□□□□ -1.07
HPS4-217ENST00000496385 LUMP51884 338 aaPredicted RBP8.39□□□□□ -1.07
HPS4-217ENST00000496385 NUBP1P53384 320 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 PNLIPRP1P54315 467 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 TBX4P57082 545 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 TMEM115Q12893 351 aaPredicted RBP8.39□□□□□ -1.07
HPS4-217ENST00000496385 DNM1P46Q6ZS02 220 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ACOT7LQ6ZUV0 252 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 MON1AQ86VX9 555 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 SERPINA9Q86WD7 417 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 MORN4Q8NDC4 146 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 OR52I2Q8NH67 350 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 AKR7LQ8NHP1 331 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 STOML3Q8TAV4 291 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 RNF141Q8WVD5 230 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 RAB40AQ8WXH6 277 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 HIST1H2BAQ96A08 127 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 ADAT1Q9BUB4 502 aaKnown RBP8.39□□□□□ -1.07
HPS4-217ENST00000496385 MAGEH1Q9H213 219 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 MVB12BQ9H7P6 319 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 FAM86C1Q9NVL1 165 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 GFOD1Q9NXC2 390 aa8.39□□□□□ -1.07
HPS4-217ENST00000496385 FBXL4Q9UKA2 621 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms