RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 BLOC1S3Q6QNY0 202 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 PRSS57Q6UWY2 283 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 WFDC8Q8IUA0 241 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 ZNF100Q8IYN0 542 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 SLC35B4Q969S0 331 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 PLPPR2Q96GM1 343 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 ZNF300Q96RE9 604 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-209ENST00000495835 CCL19Q99731 98 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 POTEKPQ9BYX7 375 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 BCL2L10Q9HD36 194 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 DLL4Q9NR61 685 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 ARGLU1Q9NWB6 273 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-209ENST00000495835 GMEB1Q9Y692 573 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 FLNAP21333 2647 aaKnown RBP21.46■■□□□ 1.03
HLA-C-209ENST00000495835 ATP4BP51164 291 aa21.46■■□□□ 1.03
HLA-C-209ENST00000495835 SLC35A1P78382 337 aa21.46■■□□□ 1.03
HLA-C-209ENST00000495835 LRIF1Q5T3J3 769 aa21.46■■□□□ 1.03
HLA-C-209ENST00000495835 ADAM5Q6NVV9 412 aa21.46■■□□□ 1.03
HLA-C-209ENST00000495835 ZNF704Q6ZNC4 412 aaPredicted RBP21.46■■□□□ 1.03
HLA-C-209ENST00000495835 BHLHA15Q7RTS1 189 aaPredicted RBP21.46■■□□□ 1.03
HLA-C-209ENST00000495835 P2RY8Q86VZ1 359 aa21.46■■□□□ 1.03
HLA-C-209ENST00000495835 AURKBQ96GD4 344 aaPredicted RBP21.46■■□□□ 1.03
HLA-C-209ENST00000495835 NAA11Q9BSU3 229 aaPredicted RBP21.46■■□□□ 1.03
HLA-C-209ENST00000495835 SPATA9Q9BWV2 254 aa21.46■■□□□ 1.03
HLA-C-209ENST00000495835 ESRP2Q9H6T0 727 aaKnown RBP21.46■■□□□ 1.03
HLA-C-209ENST00000495835 ZNF443Q9Y2A4 671 aaPredicted RBP21.46■■□□□ 1.03
HLA-C-209ENST00000495835 ZFHX3Q15911 3703 aa21.46■■□□□ 1.03
HLA-C-209ENST00000495835 HOXB9P17482 250 aaPredicted RBP21.45■■□□□ 1.02
HLA-C-209ENST00000495835 COX5AP20674 150 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 PPIBP23284 216 aaKnown RBP21.45■■□□□ 1.02
HLA-C-209ENST00000495835 AQP5P55064 265 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 COPZ1P61923 177 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 TAB1Q15750 504 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 GTDC1Q4AE62 458 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 WBP2NLQ6ICG8 309 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 ZNF836Q6ZNA1 936 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 VRK2Q86Y07 508 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 FUNDC1Q8IVP5 155 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 ZNF611Q8N823 705 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 TMEM19Q96HH6 336 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 OR11A1Q9GZK7 315 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 A4GALTQ9NPC4 353 aa21.45■■□□□ 1.02
HLA-C-209ENST00000495835 INTS9Q9NV88 658 aaKnown RBP21.45■■□□□ 1.02
HLA-C-209ENST00000495835 NOSIPQ9Y314 301 aaKnown RBP21.45■■□□□ 1.02
HLA-C-209ENST00000495835 ACANP16112 2415 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 CXCR1P25024 350 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 ACAA2P42765 397 aaKnown RBP21.44■■□□□ 1.02
HLA-C-209ENST00000495835 OR2B6P58173 313 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 NCMAPQ5T1S8 102 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 FBXW9Q5XUX1 488 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 SLC2A7Q6PXP3 512 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 P3H2Q8IVL5 708 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 WFDC11Q8NEX6 87 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 BBS10Q8TAM1 723 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 IGFBPL1Q8WX77 278 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 ZNF775Q96BV0 537 aaPredicted RBP21.44■■□□□ 1.02
HLA-C-209ENST00000495835 SPDL1Q96EA4 605 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 EBF4Q9BQW3 602 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 PIF1Q9H611 641 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 RLIMQ9NVW2 624 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 PARPBPQ9NWS1 579 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 PRSS50Q9UI38 385 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 ARID1AO14497 2285 aa21.44■■□□□ 1.02
HLA-C-209ENST00000495835 ROS1P08922 2347 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 TMEM72A0PK05 275 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 HS3ST1O14792 307 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 PGM3O95394 542 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 PAX1P15863 534 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 TIMM23BQ5SRD1 257 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 PAQR6Q6TCH4 344 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 KRTAP1-3Q8IUG1 177 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 APH1AQ96BI3 265 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 RABEP2Q9H5N1 569 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 SLC52A3Q9NQ40 469 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 CCDC167Q9P0B6 97 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 NF1P21359 2839 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 PRR14LQ5THK1 2151 aa21.43■■□□□ 1.02
HLA-C-209ENST00000495835 MRPL33O75394 65 aaKnown RBP21.42■■□□□ 1.02
HLA-C-209ENST00000495835 GPIP06744 558 aa21.42■■□□□ 1.02
HLA-C-209ENST00000495835 IMPDH2P12268 514 aa21.42■■□□□ 1.02
HLA-C-209ENST00000495835 ETS2P15036 469 aa21.42■■□□□ 1.02
HLA-C-209ENST00000495835 CCNA2P20248 432 aa21.42■■□□□ 1.02
HLA-C-209ENST00000495835 C1QTNF12Q5T7M4 302 aa21.42■■□□□ 1.02
HLA-C-209ENST00000495835 CKAP2Q8WWK9 683 aa21.42■■□□□ 1.02
HLA-C-209ENST00000495835 MUCL1Q96DR8 90 aa21.42■■□□□ 1.02
HLA-C-209ENST00000495835 MAGEB18Q96M61 343 aa21.42■■□□□ 1.02
HLA-C-209ENST00000495835 GSX2Q9BZM3 304 aa21.42■■□□□ 1.02
HLA-C-209ENST00000495835 CORO2BQ9UQ03 480 aa21.42■■□□□ 1.02
HLA-C-209ENST00000495835 GKN3PP0CG01 181 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 GGT1P19440 569 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 IGHV1-2P23083 117 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 IDUAP35475 653 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 TSC22D1Q15714 1073 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 ZNF311Q5JNZ3 666 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 CCDC103Q8IW40 242 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 CLIP4Q8N3C7 705 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 ZNF433Q8N7K0 673 aaPredicted RBP21.41■■□□□ 1.02
HLA-C-209ENST00000495835 TMEM171Q8WVE6 324 aa21.41■■□□□ 1.02
HLA-C-209ENST00000495835 SF3B5Q9BWJ5 86 aaKnown RBP21.41■■□□□ 1.02
HLA-C-209ENST00000495835 SLC25A37Q9NYZ2 338 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms