RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 RTTNQ86VV8 2226 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 PRAMEF27A3QJZ7 478 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 CLDN24A6NM45 220 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 HMGN4O00479 90 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 EIF1BO60739 113 aaKnown RBP20.43■□□□□ 0.86
COL27A1-208ENST00000494780 LBPP18428 481 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 NUDT6P53370 316 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 IRX1P78414 480 aaPredicted RBP20.43■□□□□ 0.86
COL27A1-208ENST00000494780 HMGN2P46Q86SG4 172 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 FBXL14Q8N1E6 418 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 DEPDC4Q8N2C3 294 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 CNOT9Q92600 299 aaKnown RBP20.43■□□□□ 0.86
COL27A1-208ENST00000494780 PMM1Q92871 262 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 DDIT4LQ96D03 193 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 CCDC115Q96NT0 180 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 TRNT1Q96Q11 434 aaKnown RBP20.43■□□□□ 0.86
COL27A1-208ENST00000494780 C20orf27Q9GZN8 174 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 PARPBPQ9NWS1 579 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 BTNL2Q9UIR0 455 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 HAO1Q9UJM8 370 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 PLCE1Q9P212 2302 aa20.43■□□□□ 0.86
COL27A1-208ENST00000494780 E9PBE3 544 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 ZNF208O43345 1280 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 ITGA5P08648 1049 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 CCNA2P20248 432 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 S100A3P33764 101 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 SLC1A6P48664 564 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 POLR2HP52434 150 aaKnown RBP20.42■□□□□ 0.86
COL27A1-208ENST00000494780 MAP2K6P52564 334 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 DSCR9P59020 149 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 SLC35A1P78382 337 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 TXNL4AP83876 142 aaKnown RBP20.42■□□□□ 0.86
COL27A1-208ENST00000494780 SPOCK1Q08629 439 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 FAM174BQ3ZCQ3 159 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 HMBOX1Q6NT76 420 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 MUC15Q8N387 334 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 OR10H5Q8NGA6 315 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 SORT1Q99523 831 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 NAA11Q9BSU3 229 aaPredicted RBP20.42■□□□□ 0.86
COL27A1-208ENST00000494780 AMBRA1Q9C0C7 1298 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 SSU72Q9NP77 194 aaKnown RBP20.42■□□□□ 0.86
COL27A1-208ENST00000494780 OSGIN1Q9UJX0 560 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 SLC9A8Q9Y2E8 581 aa20.42■□□□□ 0.86
COL27A1-208ENST00000494780 IGHV4-30-2A0A087WSY4 118 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 TMED7-TICAM2A0A0A6YYA0 188 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 A0A1W2PR80 420 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 AGAP5A6NIR3 686 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 M0R1B8 84 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 PDLIM1O00151 329 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 TM9SF1O15321 606 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 IFNA2P01563 188 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 ANXA11P50995 505 aaKnown RBP20.41■□□□□ 0.86
COL27A1-208ENST00000494780 FOXG1P55316 489 aaPredicted RBP20.41■□□□□ 0.86
COL27A1-208ENST00000494780 C1QTNF12Q5T7M4 302 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 ZNF544Q6NX49 715 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 PODNL1Q6PEZ8 512 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 CLEC2AQ6UVW9 174 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 CASP12Q6UXS9 341 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 RNF130Q86XS8 419 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 C17orf78Q8N4C9 275 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 TRIML2Q8N7C3 387 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 OR52E4Q8NGH9 312 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 NUF2Q9BZD4 464 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 SLC38A1Q9H2H9 487 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 DCTN4Q9UJW0 460 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 TMED7Q9Y3B3 224 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 FLVCR1Q9Y5Y0 555 aa20.41■□□□□ 0.86
COL27A1-208ENST00000494780 FBN1P35555 2871 aaKnown RBP20.4■□□□□ 0.86
COL27A1-208ENST00000494780 TMEM72A0PK05 275 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 A8MV72 311 aaPredicted RBP20.4■□□□□ 0.86
COL27A1-208ENST00000494780 FAAHO00519 579 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 AP3D1O14617 1153 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 IMPDH2P12268 514 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 FABP6P51161 128 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 GNA13Q14344 377 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 RAB35Q15286 201 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 SYPL1Q16563 259 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 KRT71Q3SY84 523 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 OGFOD2Q6N063 350 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 B3GLCTQ6Y288 498 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 LRRC74BQ6ZQY2 392 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 ANKFN1Q8N957 763 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 C1orf162Q8NEQ5 155 aaPredicted RBP20.4■□□□□ 0.86
COL27A1-208ENST00000494780 INPP5KQ9BT40 448 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 MEAF6Q9HAF1 191 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 UPB1Q9UBR1 384 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 AMDHD2Q9Y303 409 aa20.4■□□□□ 0.86
COL27A1-208ENST00000494780 A0A096LNT2 108 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 FAM234BA2RU67 622 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 RGS16O15492 202 aaPredicted RBP20.39■□□□□ 0.85
COL27A1-208ENST00000494780 C1QCP02747 245 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 UQCRBP14927 111 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 TACR3P29371 465 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 SLC1A3P43003 542 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 TGFBR3Q03167 851 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 SLC17A1Q14916 467 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 WDR93Q6P2C0 686 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 WDR31Q8NA23 367 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 WDR60Q8WVS4 1066 aa20.39■□□□□ 0.85
COL27A1-208ENST00000494780 PANX1Q96RD7 426 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms