RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 GTPBP2Q9BX10 602 aaKnown RBP9.72□□□□□ -0.85
CLCN6-208ENST00000494028 SLC26A1Q9H2B4 701 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 HMG20AQ9NP66 347 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 EXOSC4Q9NPD3 245 aaKnown RBP9.72□□□□□ -0.85
CLCN6-208ENST00000494028 CHCHD3Q9NX63 227 aaKnown RBP9.72□□□□□ -0.85
CLCN6-208ENST00000494028 TNFRSF10DQ9UBN6 386 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 B3GNT3Q9Y2A9 372 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 HIF3AQ9Y2N7 669 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 DNAH14Q0VDD8 3507 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 ZNF318Q5VUA4 2279 aa9.72□□□□□ -0.85
CLCN6-208ENST00000494028 TRBV11-1A0A0K0K1C0 115 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 HTR3EA5X5Y0 456 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 OR6C70A6NIJ9 312 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 SLC22A31A6NKX4 558 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 LRRTM2O43300 516 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 HCRTR2O43614 444 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 GDF9O60383 454 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 FADS1O60427 444 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 CDC40O60508 579 aaKnown RBP eCLIP9.71□□□□□ -0.86
CLCN6-208ENST00000494028 ZNF354AO60765 605 aaPredicted RBP9.71□□□□□ -0.86
CLCN6-208ENST00000494028 IFNGP01579 166 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 SYPP08247 313 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 TSPAN19P0C672 248 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 PEPDP12955 493 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 HK1P19367 917 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 PAICSP22234 425 aaKnown RBP9.71□□□□□ -0.86
CLCN6-208ENST00000494028 TACR3P29371 465 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 GABRA5P31644 462 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 UQCRC1P31930 480 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 MPLP40238 635 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 DUSP3P51452 185 aaPredicted RBP9.71□□□□□ -0.86
CLCN6-208ENST00000494028 SLC26A5P58743 744 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 EGR4Q05215 589 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 ACSM1Q08AH1 577 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 LPAL2Q16609 132 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 TCEAL6Q6IPX3 200 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 MRPL14Q6P1L8 145 aaKnown RBP9.71□□□□□ -0.86
CLCN6-208ENST00000494028 ZNF322Q6U7Q0 402 aaPredicted RBP9.71□□□□□ -0.86
CLCN6-208ENST00000494028 TMEM205Q6UW68 189 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 C16orf47Q6ZP98 133 aaPredicted RBP9.71□□□□□ -0.86
CLCN6-208ENST00000494028 MARCH3Q86UD3 253 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 ZFP41Q8N8Y5 198 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 LRRC75AQ8NAA5 344 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 ZBTB44Q8NCP5 570 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 OR5M3Q8NGP4 307 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 MOSPD2Q8NHP6 518 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 SPRYD4Q8WW59 207 aaPredicted RBP9.71□□□□□ -0.86
CLCN6-208ENST00000494028 LIPHQ8WWY8 451 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 HGDQ93099 445 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 TCEAL3Q969E4 200 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 PMEPA1Q969W9 287 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 TP53INP1Q96A56 240 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 MOGAT1Q96PD6 335 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 ERMAPQ96PL5 475 aaPredicted RBP9.71□□□□□ -0.86
CLCN6-208ENST00000494028 SECISBP2Q96T21 854 aaKnown RBP9.71□□□□□ -0.86
CLCN6-208ENST00000494028 CTRCQ99895 268 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 CRB3Q9BUF7 120 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 ALG8Q9BVK2 526 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 ASPNQ9BXN1 380 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 TBL1XR1Q9BZK7 514 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 ADGRL4Q9HBW9 690 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 SMURF1Q9HCE7 757 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 MMP25Q9NPA2 562 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 TOR4AQ9NXH8 423 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 H2AFY2Q9P0M6 372 aaPredicted RBP9.71□□□□□ -0.86
CLCN6-208ENST00000494028 KLHL21Q9UJP4 597 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 FBXL4Q9UKA2 621 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 ADAM18Q9Y3Q7 739 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.86
CLCN6-208ENST00000494028 PCNX3Q9H6A9 2034 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 KIF26BQ2KJY2 2108 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 PNMA8CA0A1B0GUJ8 204 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 PLD2O14939 933 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 ARPC3O15145 178 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 NDUFB5O43674 189 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 AKAP8O43823 692 aaKnown RBP9.7□□□□□ -0.86
CLCN6-208ENST00000494028 TFP02787 698 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 MRPL3P09001 348 aaKnown RBP9.7□□□□□ -0.86
CLCN6-208ENST00000494028 SP9P0CG40 484 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 HIST1H1CP16403 213 aaKnown RBP9.7□□□□□ -0.86
CLCN6-208ENST00000494028 ZNF28P17035 718 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 PSMA1P25786 263 aaKnown RBP9.7□□□□□ -0.86
CLCN6-208ENST00000494028 CD40LGP29965 261 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 EMP2P54851 167 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 RPS7P62081 194 aaKnown RBP9.7□□□□□ -0.86
CLCN6-208ENST00000494028 BDH1Q02338 343 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 LTBQ06643 244 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 ZFP36L1Q07352 338 aaKnown RBP9.7□□□□□ -0.86
CLCN6-208ENST00000494028 EFR3AQ14156 821 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 GGTLC2Q14390 218 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 TOMM34Q15785 309 aaPredicted RBP9.7□□□□□ -0.86
CLCN6-208ENST00000494028 ISXQ2M1V0 245 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 KLHL12Q53G59 568 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 LCN1P1Q5VSP4 162 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 CD200R1LQ6Q8B3 271 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 DPY19L2P2Q6ZN68 376 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 RTL4Q6ZR62 310 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 FAM122BQ7Z309 247 aa9.7□□□□□ -0.86
CLCN6-208ENST00000494028 CPEB2Q7Z5Q1 589 aaKnown RBP9.7□□□□□ -0.86
CLCN6-208ENST00000494028 LHFPL3Q86UP9 236 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms